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Aliases for RPL17P7 Gene

Aliases for RPL17P7 Gene

  • Ribosomal Protein L17 Pseudogene 7 2 3
  • RPL17_3_82 3
  • BX679664.3 5
  • RPL17L 3

External Ids for RPL17P7 Gene

Previous GeneCards Identifiers for RPL17P7 Gene

  • GC01P109318
  • GC01P109535

Summaries for RPL17P7 Gene

GeneCards Summary for RPL17P7 Gene

RPL17P7 (Ribosomal Protein L17 Pseudogene 7) is a Pseudogene.

Additional gene information for RPL17P7 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL17P7 Gene

Genomics for RPL17P7 Gene

Regulatory Elements for RPL17P7 Gene

Enhancers for RPL17P7 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01H109482 1.2 ENCODE 110.5 +491.9 491850 2.3 YBX1 FEZF1 DMAP1 YY1 ZNF143 ZNF548 SP3 NFYC ZC3H11A ZFP41 ENSG00000258634 RPL17P7 PRPF38B STRIP1 SYPL2 CLCC1 RPS27P6 ENSG00000273373 GSTM2 RBM15
GH01H108197 1.6 FANTOM5 ENCODE dbSUPER 23.9 -792.6 -792612 3.9 SIN3A ZNF2 ZBTB7B ZNF143 FOS DEK SP3 REST SMARCB1 KAT8 SLC25A24 PRPF38B RPL17P7 RPS27P6 ENSG00000226822 FAM102B ENSG00000260879 PIR34396
GH01H109099 1.4 ENCODE dbSUPER 25.8 +108.2 108218 1.9 MLX ZFP64 DMAP1 YY1 SLC30A9 ZNF143 SP3 MEF2D SSRP1 ZNF610 ENSG00000258634 STRIP1 PRPF38B RPL17P7 GNAI3 ENSG00000232971 SLC25A24P2 ENSG00000238122 ENSG00000235005 C1orf194
GH01H109493 1.1 ENCODE 27.7 +501.7 501708 1.6 PKNOX1 ARID4B SIN3A ZNF2 YY1 ZNF207 ZNF143 ZNF548 SP3 SP5 ENSG00000258634 PRPF38B RPL17P7 SYPL2 STRIP1 ENSG00000235005 ENSG00000232971 RPS27P6 ENSG00000273373 RBM15
GH01H108696 1.7 dbSUPER 15.7 -293.1 -293063 4.6 HDGF MTA2 ARNT TSC22D4 NONO ZNF366 ZNF184 POLR2A ZNF512 NBN RPL17P7 PSRC1 PRPF38B ENSG00000232971 HENMT1 RPS27P6 SLC25A24 GC01M108671 GC01P108697
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL17P7 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL17P7 Gene

Genomic Locations for RPL17P7 Gene
chr1:108,992,254-108,992,871
(GRCh38/hg38)
Size:
618 bases
Orientation:
Plus strand
chr1:109,534,858-109,535,493
(GRCh37/hg19)

Genomic View for RPL17P7 Gene

Genes around RPL17P7 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL17P7 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL17P7 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL17P7 Gene

Proteins for RPL17P7 Gene

Post-translational modifications for RPL17P7 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL17P7 Gene

Domains & Families for RPL17P7 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL17P7 Gene

Function for RPL17P7 Gene

Phenotypes From GWAS Catalog for RPL17P7 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL17P7 Gene

Localization for RPL17P7 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL17P7 Gene

Pathways & Interactions for RPL17P7 Gene

SuperPathways for RPL17P7 Gene

No Data Available

Interacting Proteins for RPL17P7 Gene

Gene Ontology (GO) - Biological Process for RPL17P7 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL17P7 Gene

Drugs & Compounds for RPL17P7 Gene

No Compound Related Data Available

Transcripts for RPL17P7 Gene

mRNA/cDNA for RPL17P7 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL17P7 Gene

No ASD Table

Relevant External Links for RPL17P7 Gene

GeneLoc Exon Structure for
RPL17P7
ECgene alternative splicing isoforms for
RPL17P7

Expression for RPL17P7 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL17P7 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL17P7 Gene:

RPL17P7
genes like me logo Genes that share expression patterns with RPL17P7: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL17P7 Gene

Orthologs for RPL17P7 Gene

Evolution for RPL17P7 Gene

ENSEMBL:
Gene Tree for RPL17P7 (if available)
TreeFam:
Gene Tree for RPL17P7 (if available)

No data available for Orthologs for RPL17P7 Gene

Paralogs for RPL17P7 Gene

No data available for Paralogs for RPL17P7 Gene

Variants for RPL17P7 Gene

Relevant External Links for RPL17P7 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL17P7

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL17P7 Gene

Disorders for RPL17P7 Gene

No disorders were found for RPL17P7 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL17P7 Gene

Publications for RPL17P7 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 60
  2. The sequence of the human genome. (PMID: 11181995) Venter JC … Zhu X (Science (New York, N.Y.) 2001) 3 60

Products for RPL17P7 Gene

Sources for RPL17P7 Gene

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