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Aliases for RPL17P7 Gene

Aliases for RPL17P7 Gene

  • Ribosomal Protein L17 Pseudogene 7 2 3
  • RP11-20O24.4 5
  • RPL17_3_82 3
  • RPL17L 3

External Ids for RPL17P7 Gene

Previous GeneCards Identifiers for RPL17P7 Gene

  • GC01P109318
  • GC01P109535

Summaries for RPL17P7 Gene

GeneCards Summary for RPL17P7 Gene

RPL17P7 (Ribosomal Protein L17 Pseudogene 7) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL17P7 Gene

Genomics for RPL17P7 Gene

Regulatory Elements for RPL17P7 Gene

Enhancers for RPL17P7 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01G109482 1.2 ENCODE 52.2 +491.9 491850 2.3 YBX1 FEZF1 DMAP1 YY1 ZNF143 ZNF548 ZNF263 SP3 NFYC TBX21 ENSG00000258634 RPL17P7 PRPF38B SYPL2 RPS27P6 AMIGO1 ENSG00000273373 GSTM5 UBL4B ATXN7L2
GH01G109368 2 FANTOM5 Ensembl ENCODE dbSUPER 18.8 +380.3 380314 8.2 HDGF FOXA2 PKNOX1 CREB3L1 ARNT SIN3A DMAP1 ZNF2 ZNF766 CBX5 SYPL2 ENSG00000258634 RPL17P7 PRPF38B AMIGO1 ATXN7L2 SORT1 GC01P109313
GH01G109099 1.4 ENCODE dbSUPER 16.7 +108.2 108218 1.9 MLX CREB3L1 AGO1 ZFP64 DMAP1 YY1 SLC30A9 ZNF143 ZNF263 SP3 ENSG00000258634 RPL17P7 GNAI3 C1orf194 RPS27P6 PRPF38B TMEM167B MYBPHL SCARNA2 ENSG00000270066
GH01G109272 2.1 VISTA Ensembl ENCODE dbSUPER 10.7 +283.6 283591 6.3 HDGF PKNOX1 FOXA2 MLX ARNT ARID4B SIN3A DMAP1 ZBTB7B YY1 CELSR2 PRPF38B SORT1 ENSG00000258634 RPL17P7 PSRC1 RPL7P8 PIR46363
GH01G109796 1.9 FANTOM5 Ensembl ENCODE dbSUPER 9.8 +804.8 804849 0.7 HDGF PKNOX1 ARNT AGO1 ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 CSF1 ENSG00000258634 ENSG00000235005 RPL17P7 GSTM2 PIR57260 GC01M109813
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL17P7 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL17P7 Gene

Chromosome:
1
Start:
108,992,254 bp from pter
End:
108,992,871 bp from pter
Size:
618 bases
Orientation:
Plus strand

Genomic View for RPL17P7 Gene

Genes around RPL17P7 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL17P7 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL17P7 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL17P7 Gene

Proteins for RPL17P7 Gene

Post-translational modifications for RPL17P7 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL17P7 Gene

Domains & Families for RPL17P7 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL17P7 Gene

Function for RPL17P7 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL17P7 Gene

Localization for RPL17P7 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL17P7 Gene

Pathways & Interactions for RPL17P7 Gene

SuperPathways for RPL17P7 Gene

No Data Available

Interacting Proteins for RPL17P7 Gene

Gene Ontology (GO) - Biological Process for RPL17P7 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL17P7 Gene

Drugs & Compounds for RPL17P7 Gene

No Compound Related Data Available

Transcripts for RPL17P7 Gene

mRNA/cDNA for RPL17P7 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL17P7 Gene

No ASD Table

Relevant External Links for RPL17P7 Gene

GeneLoc Exon Structure for
RPL17P7
ECgene alternative splicing isoforms for
RPL17P7

Expression for RPL17P7 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL17P7 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL17P7 Gene:

RPL17P7
genes like me logo Genes that share expression patterns with RPL17P7: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL17P7 Gene

Orthologs for RPL17P7 Gene

Evolution for RPL17P7 Gene

ENSEMBL:
Gene Tree for RPL17P7 (if available)
TreeFam:
Gene Tree for RPL17P7 (if available)

No data available for Orthologs for RPL17P7 Gene

Paralogs for RPL17P7 Gene

No data available for Paralogs for RPL17P7 Gene

Variants for RPL17P7 Gene

Relevant External Links for RPL17P7 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL17P7

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL17P7 Gene

Disorders for RPL17P7 Gene

No disorders were found for RPL17P7 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL17P7 Gene

Publications for RPL17P7 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. The sequence of the human genome. (PMID: 11181995) Venter J.C. … Zhu X. (Science 2001) 3 64

Products for RPL17P7 Gene

Sources for RPL17P7 Gene

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