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Aliases for RPL17P6 Gene

Aliases for RPL17P6 Gene

  • Ribosomal Protein L17 Pseudogene 6 2 3
  • RP4-706A16.3 5
  • RPL17_1_64 3

External Ids for RPL17P6 Gene

Previous GeneCards Identifiers for RPL17P6 Gene

  • GC01P077366
  • GC01P077596

Summaries for RPL17P6 Gene

GeneCards Summary for RPL17P6 Gene

RPL17P6 (Ribosomal Protein L17 Pseudogene 6) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL17P6 Gene

Genomics for RPL17P6 Gene

Regulatory Elements for RPL17P6 Gene

Enhancers for RPL17P6 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01F077680 0.5 ENCODE 42 +553.8 553824 4.0 HDGF PKNOX1 CREB3L1 MLX WRNIP1 ZFP64 ARID4B SIN3A FEZF1 DMAP1 RPL17P6 ENSG00000273338 GIPC2 AK5 DNAJB4 ZZZ3 RN7SL370P
GH01F078002 0.9 FANTOM5 ENCODE 33 +877.9 877855 8.6 HDGF PKNOX1 ARNT CREB3L1 WRNIP1 ZFP64 ARID4B SIN3A FEZF1 ZNF2 RPL17P6 ENSG00000273338 DNAJB4 GIPC2 NEXN LOC100131495
GH01F077313 0.2 Ensembl 15.1 +184.7 184660 0.5 PKNOX1 CREB3L1 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 ZNF766 ZNF263 RPL17P6 ZZZ3 ENSG00000273338 AK5 ENSG00000233099
GH01F077778 0.4 ENCODE 15 +650.7 650732 1.7 HDGF PKNOX1 ATF1 ARID4B SIN3A FEZF1 GLI4 DMAP1 ZNF48 ZNF2 RPL17P6 ZZZ3 ENSG00000273338 GIPC2 MIGA1 RNA5SP21
GH01F077509 1.1 FANTOM5 Ensembl ENCODE 10.4 +383.8 383845 7.1 HDGF PKNOX1 CREB3L1 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 ZNF766 AK5 ENSG00000233099 RNU7-8P RPL17P6 ZZZ3 GIPC2 FUBP1 GC01P077502 GC01P077577
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RPL17P6 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL17P6 Gene

Chromosome:
1
Start:
77,129,074 bp from pter
End:
77,129,703 bp from pter
Size:
630 bases
Orientation:
Plus strand

Genomic View for RPL17P6 Gene

Genes around RPL17P6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL17P6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL17P6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL17P6 Gene

Proteins for RPL17P6 Gene

Post-translational modifications for RPL17P6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL17P6 Gene

Domains & Families for RPL17P6 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL17P6 Gene

Function for RPL17P6 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL17P6 Gene

Localization for RPL17P6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL17P6 Gene

Pathways & Interactions for RPL17P6 Gene

SuperPathways for RPL17P6 Gene

No Data Available

Interacting Proteins for RPL17P6 Gene

Gene Ontology (GO) - Biological Process for RPL17P6 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL17P6 Gene

Transcripts for RPL17P6 Gene

mRNA/cDNA for RPL17P6 Gene

(1) REFSEQ mRNAs :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL17P6 Gene

No ASD Table

Relevant External Links for RPL17P6 Gene

GeneLoc Exon Structure for
RPL17P6
ECgene alternative splicing isoforms for
RPL17P6

Expression for RPL17P6 Gene

mRNA expression in normal human tissues for RPL17P6 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL17P6 Gene:

RPL17P6
genes like me logo Genes that share expression patterns with RPL17P6: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL17P6 Gene

Orthologs for RPL17P6 Gene

Evolution for RPL17P6 Gene

ENSEMBL:
Gene Tree for RPL17P6 (if available)
TreeFam:
Gene Tree for RPL17P6 (if available)

No data available for Orthologs for RPL17P6 Gene

Paralogs for RPL17P6 Gene

No data available for Paralogs for RPL17P6 Gene

Variants for RPL17P6 Gene

Relevant External Links for RPL17P6 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL17P6

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL17P6 Gene

Disorders for RPL17P6 Gene

Relevant External Links for RPL17P6

Genetic Association Database (GAD)
RPL17P6

No disorders were found for RPL17P6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL17P6 Gene

Publications for RPL17P6 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. Genetic correlates of brain aging on MRI and cognitive test measures: a genome-wide association and linkage analysis in the Framingham Study. (PMID: 17903297) Seshadri S. … Wolf P.A. (BMC Med. Genet. 2007) 46 64
  3. The sequence of the human genome. (PMID: 11181995) Venter J.C. … Zhu X. (Science 2001) 3 64

Products for RPL17P6 Gene

Sources for RPL17P6 Gene

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