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Aliases for RPL17P45 Gene

Aliases for RPL17P45 Gene

  • Ribosomal Protein L17 Pseudogene 45 2 3 5
  • RPL17_16_1598 3

External Ids for RPL17P45 Gene

Previous GeneCards Identifiers for RPL17P45 Gene

  • GC18U900475
  • GC18M037724

Summaries for RPL17P45 Gene

GeneCards Summary for RPL17P45 Gene

RPL17P45 (Ribosomal Protein L17 Pseudogene 45) is a Pseudogene.

Additional gene information for RPL17P45 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL17P45 Gene

Genomics for RPL17P45 Gene

GeneHancer (GH) Regulatory Elements for RPL17P45 Gene

Promoters and enhancers for RPL17P45 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18I040212 Enhancer 0.2 ENCODE 0.2 -67.7 -67708 0.2 GC18P040213 RPL17P45
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL17P45 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL17P45 Gene

Genomic Locations for RPL17P45 Gene
chr18:40,143,926-40,144,504
(GRCh38/hg38)
Size:
579 bases
Orientation:
Minus strand
chr18:37,723,890-37,724,468
(GRCh37/hg19)

Genomic View for RPL17P45 Gene

Genes around RPL17P45 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL17P45 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL17P45 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL17P45 Gene

Proteins for RPL17P45 Gene

Post-translational modifications for RPL17P45 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL17P45 Gene

Domains & Families for RPL17P45 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL17P45 Gene

Function for RPL17P45 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL17P45 Gene

Localization for RPL17P45 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL17P45 Gene

Pathways & Interactions for RPL17P45 Gene

SuperPathways for RPL17P45 Gene

No Data Available

Interacting Proteins for RPL17P45 Gene

Gene Ontology (GO) - Biological Process for RPL17P45 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL17P45 Gene

Drugs & Compounds for RPL17P45 Gene

No Compound Related Data Available

Transcripts for RPL17P45 Gene

mRNA/cDNA for RPL17P45 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL17P45 Gene

No ASD Table

Relevant External Links for RPL17P45 Gene

GeneLoc Exon Structure for
RPL17P45
ECgene alternative splicing isoforms for
RPL17P45

Expression for RPL17P45 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL17P45 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL17P45 Gene:

RPL17P45
genes like me logo Genes that share expression patterns with RPL17P45: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL17P45 Gene

Orthologs for RPL17P45 Gene

Evolution for RPL17P45 Gene

ENSEMBL:
Gene Tree for RPL17P45 (if available)
TreeFam:
Gene Tree for RPL17P45 (if available)

No data available for Orthologs for RPL17P45 Gene

Paralogs for RPL17P45 Gene

No data available for Paralogs for RPL17P45 Gene

Variants for RPL17P45 Gene

Additional Variant Information for RPL17P45 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL17P45

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL17P45 Gene

Disorders for RPL17P45 Gene

Additional Disease Information for RPL17P45

Genetic Association Database
(GAD)

No disorders were found for RPL17P45 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL17P45 Gene

Publications for RPL17P45 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58
  2. A genome-wide association meta-analysis identifies new childhood obesity loci. (PMID: 22484627) Bradfield JP … Early Growth Genetics Consortium (Nature genetics 2012) 44 58
  3. A genome-wide association study identifies a novel major locus for glycemic control in type 1 diabetes, as measured by both A1C and glucose. (PMID: 19875614) Paterson AD … Diabetes Control and Complications Trial/Epidemiology of Diabetes Interventions and Complications Research Group (Diabetes 2010) 44 58
  4. Genome-wide association with bone mass and geometry in the Framingham Heart Study. (PMID: 17903296) Kiel DP … Karasik D (BMC medical genetics 2007) 44 58
  5. Genome-wide association of echocardiographic dimensions, brachial artery endothelial function and treadmill exercise responses in the Framingham Heart Study. (PMID: 17903301) Vasan RS … Benjamin EJ (BMC medical genetics 2007) 44 58

Products for RPL17P45 Gene

Sources for RPL17P45 Gene

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