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Aliases for RPL17P42 Gene

Aliases for RPL17P42 Gene

  • Ribosomal Protein L17 Pseudogene 42 2 3
  • RPL17_25_1540 3

External Ids for RPL17P42 Gene

Previous GeneCards Identifiers for RPL17P42 Gene

  • GC17U901143
  • GC17P034047
  • GC17P030232

Summaries for RPL17P42 Gene

GeneCards Summary for RPL17P42 Gene

RPL17P42 (Ribosomal Protein L17 Pseudogene 42) is a Pseudogene.

Additional gene information for RPL17P42 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL17P42 Gene

Genomics for RPL17P42 Gene

Regulatory Elements for RPL17P42 Gene

Enhancers for RPL17P42 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH17H035725 1.1 Ensembl ENCODE 0.4 +6.6 6580 2 PKNOX1 NFIB FEZF1 ZNF366 SCRT2 ZNF350 CEBPB ZEB2 ZNF623 ZFP69B AP2B1 ZNF830 C17orf50 MMP28 LIG3 GAS2L2 RPL17P42 RASL10B
GH17H035717 0.6 ENCODE 0.7 -2.8 -2752 0 MAX MNT YY1 JUND GATA3 HNF4G ZBTB33 HNF4A C17orf50 MMP28 AP2B1 RPL17P42 TAF15
GH17H035718 0.4 ENCODE 0.7 -1.7 -1671 0 PRDM6 ZSCAN4 C17orf50 MMP28 AP2B1 RPL17P42 TAF15
GH17H035716 0.2 ENCODE 0.7 -3.5 -3473 0 MMP28 RPL17P42 TAF15
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL17P42 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL17P42 Gene

Chromosome:
17
Start:
35,719,907 bp from pter
End:
35,720,426 bp from pter
Size:
520 bases
Orientation:
Plus strand

Genomic View for RPL17P42 Gene

Genes around RPL17P42 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL17P42 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL17P42 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL17P42 Gene

Proteins for RPL17P42 Gene

Post-translational modifications for RPL17P42 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL17P42 Gene

Domains & Families for RPL17P42 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL17P42 Gene

Function for RPL17P42 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPL17P42
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL17P42 Gene

Localization for RPL17P42 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL17P42 Gene

Pathways & Interactions for RPL17P42 Gene

SuperPathways for RPL17P42 Gene

No Data Available

Interacting Proteins for RPL17P42 Gene

Gene Ontology (GO) - Biological Process for RPL17P42 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL17P42 Gene

Drugs & Compounds for RPL17P42 Gene

No Compound Related Data Available

Transcripts for RPL17P42 Gene

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPL17P42
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for RPL17P42 Gene

No ASD Table

Relevant External Links for RPL17P42 Gene

GeneLoc Exon Structure for
RPL17P42
ECgene alternative splicing isoforms for
RPL17P42

No data available for mRNA/cDNA for RPL17P42 Gene

Expression for RPL17P42 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL17P42 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL17P42 Gene:

RPL17P42
genes like me logo Genes that share expression patterns with RPL17P42: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL17P42 Gene

Orthologs for RPL17P42 Gene

No data available for Orthologs and Evolution for RPL17P42 Gene

Paralogs for RPL17P42 Gene

No data available for Paralogs for RPL17P42 Gene

Variants for RPL17P42 Gene

Relevant External Links for RPL17P42 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL17P42

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL17P42 Gene

Disorders for RPL17P42 Gene

No disorders were found for RPL17P42 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL17P42 Gene

Publications for RPL17P42 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 60

Products for RPL17P42 Gene

Sources for RPL17P42 Gene

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