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Aliases for RPL17P40 Gene

Aliases for RPL17P40 Gene

  • Ribosomal Protein L17 Pseudogene 40 2 3 5
  • RPL17_15_1477 3

External Ids for RPL17P40 Gene

Previous GeneCards Identifiers for RPL17P40 Gene

  • GC16U900951

Summaries for RPL17P40 Gene

GeneCards Summary for RPL17P40 Gene

RPL17P40 (Ribosomal Protein L17 Pseudogene 40) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL17P40 Gene

Genomics for RPL17P40 Gene

Regulatory Elements for RPL17P40 Gene

Enhancers for RPL17P40 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH16G016095 1.3 Ensembl ENCODE dbSUPER 0.7 -1.5 -1519 3.2 ATF1 FOXA2 PKNOX1 ARNT YBX1 PLRG1 TCF12 ZNF366 EGR1 PCBP1 NPIPA5 ABCC1 RPL17P40 PIR44788
GH16G016092 1.1 ENCODE dbSUPER 0.7 +1.7 1670 1.9 ZFP64 RAD21 PCBP1 ZNF202 ZNF654 ZBTB11 ZNF426 ZNF623 ZNF781 ZNF518A NPIPA5 LOC100505915 NOMO3 RPL17P40 GC16P016010
GH16G016099 0.9 ENCODE dbSUPER 0.7 -4.6 -4556 0.7 TBX3 ZNF766 RFX1 ZNF740 ZKSCAN8 BACH1 CUX1 IRF1 GTF2A2 RPL17P40 PIR44788
GH16G016073 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +20.1 20088 4.0 BCOR CTCF ESRRA TEAD4 ZMYM3 MAX ZIC2 ZKSCAN1 POLR2A HLF ABCC1 NDE1 RPL17P40 GC16P016010
GH16G016119 1.6 FANTOM5 ENCODE dbSUPER 0.3 -25.5 -25467 2.8 PKNOX1 FOXA2 ATF1 ARNT TCF12 GATA2 FOS NCOA1 ZNF592 MEF2D RNU6-213P FOPNL MIR3179-2 NDE1 ABCC1 RPL17P40 PIR44788
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL17P40 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL17P40 Gene

16,094,033 bp from pter
16,095,209 bp from pter
1,177 bases
Minus strand

Genomic View for RPL17P40 Gene

Genes around RPL17P40 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL17P40 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL17P40 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL17P40 Gene

Proteins for RPL17P40 Gene

Post-translational modifications for RPL17P40 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL17P40 Gene

Domains & Families for RPL17P40 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL17P40 Gene

Function for RPL17P40 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL17P40 Gene

Localization for RPL17P40 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL17P40 Gene

Pathways & Interactions for RPL17P40 Gene

SuperPathways for RPL17P40 Gene

No Data Available

Interacting Proteins for RPL17P40 Gene

Gene Ontology (GO) - Biological Process for RPL17P40 Gene


No data available for Pathways by source and SIGNOR curated interactions for RPL17P40 Gene

Drugs & Compounds for RPL17P40 Gene

No Compound Related Data Available

Transcripts for RPL17P40 Gene

mRNA/cDNA for RPL17P40 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL17P40 Gene

No ASD Table

Relevant External Links for RPL17P40 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for RPL17P40 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL17P40 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL17P40 Gene:

genes like me logo Genes that share expression patterns with RPL17P40: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL17P40 Gene

Orthologs for RPL17P40 Gene

Evolution for RPL17P40 Gene

Gene Tree for RPL17P40 (if available)
Gene Tree for RPL17P40 (if available)

No data available for Orthologs for RPL17P40 Gene

Paralogs for RPL17P40 Gene

No data available for Paralogs for RPL17P40 Gene

Variants for RPL17P40 Gene

Relevant External Links for RPL17P40 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL17P40 Gene

Disorders for RPL17P40 Gene

No disorders were found for RPL17P40 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL17P40 Gene

Publications for RPL17P40 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL17P40 Gene

Sources for RPL17P40 Gene

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