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Aliases for RPL17P4 Gene

Aliases for RPL17P4 Gene

  • Ribosomal Protein L17 Pseudogene 4 2 3
  • RPL17_23_1411 3
  • AL138976.1 5

External Ids for RPL17P4 Gene

Previous GeneCards Identifiers for RPL17P4 Gene

  • GC14U900043
  • GC14P101739
  • GC14P102819
  • GC14P103750

Summaries for RPL17P4 Gene

GeneCards Summary for RPL17P4 Gene

RPL17P4 (Ribosomal Protein L17 Pseudogene 4) is a Pseudogene.

Additional gene information for RPL17P4 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL17P4 Gene

Genomics for RPL17P4 Gene

GeneHancer (GH) Regulatory Elements for RPL17P4 Gene

Promoters and enhancers for RPL17P4 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14I103282 Enhancer 0.7 ENCODE 550.8 -1.3 -1279 0.2 SMARCA5 CTCF STAT1 ESRRA ZNF687 MAZ REST RAD21 YY1 POLR2A RPL17P4 RAP2CP1 GC14P103260
GH14I103281 Enhancer 0.6 ENCODE 550.8 -0.9 -877 0.5 CTCF ESRRA ZNF687 MAZ REST ZNF48 RAD21 YY1 ZNF341 ZNF143 RPL17P4 ENSG00000259775 RAP2CP1 GC14P103260
GH14I103284 Enhancer 0.7 ENCODE 0.8 +2.0 2007 1.3 MXI1 USF1 FOXA2 JUN MAX RAD21 RARA YY1 FOSL1 FOSL2 ENSG00000259775 RAP2CP1 RPL17P4 GC14P103260 GC14M103316
GH14I103314 Enhancer 1.4 FANTOM5 Ensembl ENCODE 0.3 +32.4 32433 1.7 ATF1 FOXA2 ZNF133 ARID4B ZNF48 YY1 TCF12 GATA2 ATF7 RXRA GC14M103316 LOC105370686 LOC105378183 ENSG00000259775 TNFAIP2 EXOC3L4 RPL17P4
GH14I103292 Enhancer 0.8 ENCODE 0.4 +10.1 10071 0.2 RB1 ARID4B SIN3A ZNF2 IRF4 RAD21 YY1 EGR1 ARID2 ZNF143 RPL17P4 GC14M103316 GC14P103260
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL17P4 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL17P4 Gene

Genomic Locations for RPL17P4 Gene
chr14:103,282,898-103,283,498
(GRCh38/hg38)
Size:
601 bases
Orientation:
Plus strand
chr14:103,749,235-103,749,835
(GRCh37/hg19)

Genomic View for RPL17P4 Gene

Genes around RPL17P4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL17P4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL17P4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL17P4 Gene

Proteins for RPL17P4 Gene

Post-translational modifications for RPL17P4 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL17P4 Gene

Domains & Families for RPL17P4 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL17P4 Gene

Function for RPL17P4 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL17P4 Gene

Localization for RPL17P4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL17P4 Gene

Pathways & Interactions for RPL17P4 Gene

SuperPathways for RPL17P4 Gene

No Data Available

Interacting Proteins for RPL17P4 Gene

Gene Ontology (GO) - Biological Process for RPL17P4 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL17P4 Gene

Drugs & Compounds for RPL17P4 Gene

No Compound Related Data Available

Transcripts for RPL17P4 Gene

mRNA/cDNA for RPL17P4 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL17P4 Gene

No ASD Table

Relevant External Links for RPL17P4 Gene

GeneLoc Exon Structure for
RPL17P4
ECgene alternative splicing isoforms for
RPL17P4

Expression for RPL17P4 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL17P4 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL17P4 Gene:

RPL17P4
genes like me logo Genes that share expression patterns with RPL17P4: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL17P4 Gene

Orthologs for RPL17P4 Gene

Evolution for RPL17P4 Gene

ENSEMBL:
Gene Tree for RPL17P4 (if available)
TreeFam:
Gene Tree for RPL17P4 (if available)

No data available for Orthologs for RPL17P4 Gene

Paralogs for RPL17P4 Gene

No data available for Paralogs for RPL17P4 Gene

Variants for RPL17P4 Gene

Additional Variant Information for RPL17P4 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL17P4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL17P4 Gene

Disorders for RPL17P4 Gene

No disorders were found for RPL17P4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL17P4 Gene

Publications for RPL17P4 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPL17P4 Gene

Sources for RPL17P4 Gene

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