Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RPL17P36 Gene

Aliases for RPL17P36 Gene

  • Ribosomal Protein L17 Pseudogene 36 2 3 5
  • RPL17_11_1102 3

External Ids for RPL17P36 Gene

Previous GeneCards Identifiers for RPL17P36 Gene

  • GC10M120624

Summaries for RPL17P36 Gene

GeneCards Summary for RPL17P36 Gene

RPL17P36 (Ribosomal Protein L17 Pseudogene 36) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL17P36 Gene

Genomics for RPL17P36 Gene

Regulatory Elements for RPL17P36 Gene

Enhancers for RPL17P36 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10F119783 1.5 FANTOM5 Ensembl ENCODE 34.8 -913.0 -912964 4.8 ATF1 ARID4B FEZF1 DMAP1 YY1 GTF3C2 ZNF121 ZNF202 SP5 JUNB SEC23IP RPL17P36 INPP5F RPL21P16 MCMBP TXNP1 RN7SL846P GC10M119816
GH10F119333 1.1 Ensembl ENCODE 27.8 -463.5 -463519 5.5 PKNOX1 TFAP4 KLF17 FEZF1 ZBTB40 ZIC2 POLR2A ZNF366 ZNF416 ZNF548 RPL17P36 SEC23IP MCMBP LOC105378511 GC10P119246
GH10F119279 1.4 FANTOM5 Ensembl ENCODE 25.2 -410.6 -410564 7.6 MLX ARID4B DMAP1 ZNF48 ZNF548 ZHX2 JUNB REST KAT8 NFIL3 SEC23IP RPL17P36 MCMBP INPP5F SFXN4 GRK5 GC10P119246 LOC105378511
GH10F119205 1.3 FANTOM5 ENCODE 24.5 -337.3 -337260 8.3 PKNOX1 WRNIP1 ARID4B SIN3A FEZF1 DMAP1 ZNF2 ZNF143 ZNF263 SP5 SFXN4 RPL17P36 SEC23IP PHACTR2P1 GRK5 PRDX3 EIF3A GRK5-IT1 RN7SL749P
GH10F119089 0.9 FANTOM5 Ensembl ENCODE 23.9 -218.3 -218306 3.0 HDGF PKNOX1 ARNT CREB3L1 ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 SEC23IP RPL17P36 MCMBP INPP5F ENSG00000222588 SNORA19 NANOS1 ENSG00000271343 GC10P119080
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RPL17P36 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL17P36 Gene

Chromosome:
10
Start:
118,872,014 bp from pter
End:
118,872,637 bp from pter
Size:
624 bases
Orientation:
Minus strand

Genomic View for RPL17P36 Gene

Genes around RPL17P36 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL17P36 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL17P36 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL17P36 Gene

Proteins for RPL17P36 Gene

Post-translational modifications for RPL17P36 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL17P36 Gene

Domains & Families for RPL17P36 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL17P36 Gene

Function for RPL17P36 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL17P36 Gene

Localization for RPL17P36 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL17P36 Gene

Pathways & Interactions for RPL17P36 Gene

SuperPathways for RPL17P36 Gene

No Data Available

Interacting Proteins for RPL17P36 Gene

Gene Ontology (GO) - Biological Process for RPL17P36 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL17P36 Gene

Transcripts for RPL17P36 Gene

mRNA/cDNA for RPL17P36 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL17P36 Gene

No ASD Table

Relevant External Links for RPL17P36 Gene

GeneLoc Exon Structure for
RPL17P36
ECgene alternative splicing isoforms for
RPL17P36

Expression for RPL17P36 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL17P36 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL17P36 Gene:

RPL17P36
genes like me logo Genes that share expression patterns with RPL17P36: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL17P36 Gene

Orthologs for RPL17P36 Gene

Evolution for RPL17P36 Gene

ENSEMBL:
Gene Tree for RPL17P36 (if available)
TreeFam:
Gene Tree for RPL17P36 (if available)

No data available for Orthologs for RPL17P36 Gene

Paralogs for RPL17P36 Gene

No data available for Paralogs for RPL17P36 Gene

Variants for RPL17P36 Gene

Relevant External Links for RPL17P36 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL17P36

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL17P36 Gene

Disorders for RPL17P36 Gene

Relevant External Links for RPL17P36

Genetic Association Database (GAD)
RPL17P36

No disorders were found for RPL17P36 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL17P36 Gene

Publications for RPL17P36 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL17P36 Gene

Sources for RPL17P36 Gene

Content
Loading form....