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Aliases for RPL17P29 Gene

Aliases for RPL17P29 Gene

  • Ribosomal Protein L17 Pseudogene 29 2 3
  • RPL17_18_874 3
  • AF131215.1 5

External Ids for RPL17P29 Gene

Previous GeneCards Identifiers for RPL17P29 Gene

  • GC08U901164
  • GC08P011033

Summaries for RPL17P29 Gene

GeneCards Summary for RPL17P29 Gene

RPL17P29 (Ribosomal Protein L17 Pseudogene 29) is a Pseudogene.

Additional gene information for RPL17P29 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL17P29 Gene

Genomics for RPL17P29 Gene

Regulatory Elements for RPL17P29 Gene

Enhancers for RPL17P29 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH08H011178 0.5 FANTOM5 0.7 +3.9 3940 0 JUND ZNF600 XKR6 ENSG00000254936 MTMR9 RPL17P29 GC08M011176
GH08H011174 0.3 FANTOM5 0.7 -0.2 -172 0 ENSG00000255310 XKR6 ENSG00000254936 RPL17P29 ENSG00000254556
GH08H011168 0.4 ENCODE 0.4 -6.0 -5962 1 ZNF680 ENSG00000254936 XKR6 ENSG00000269918 RPL17P29 ENSG00000254556
GH08H011138 0.4 ENCODE 0.3 -35.6 -35633 1 POLR2A RCOR1 LOC105379241 XKR6 ENSG00000255518 ENSG00000254556 RPL17P29
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL17P29 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL17P29 Gene

Chromosome:
8
Start:
11,175,010 bp from pter
End:
11,175,616 bp from pter
Size:
607 bases
Orientation:
Plus strand

Genomic View for RPL17P29 Gene

Genes around RPL17P29 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL17P29 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL17P29 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL17P29 Gene

Proteins for RPL17P29 Gene

Post-translational modifications for RPL17P29 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL17P29 Gene

Domains & Families for RPL17P29 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL17P29 Gene

Function for RPL17P29 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPL17P29
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL17P29 Gene

Localization for RPL17P29 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL17P29 Gene

Pathways & Interactions for RPL17P29 Gene

SuperPathways for RPL17P29 Gene

No Data Available

Interacting Proteins for RPL17P29 Gene

Gene Ontology (GO) - Biological Process for RPL17P29 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL17P29 Gene

Drugs & Compounds for RPL17P29 Gene

No Compound Related Data Available

Transcripts for RPL17P29 Gene

mRNA/cDNA for RPL17P29 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPL17P29
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for RPL17P29 Gene

No ASD Table

Relevant External Links for RPL17P29 Gene

GeneLoc Exon Structure for
RPL17P29
ECgene alternative splicing isoforms for
RPL17P29

Expression for RPL17P29 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL17P29 Gene

mRNA differential expression in normal tissues according to GTEx for RPL17P29 Gene

This gene is overexpressed in Brain - Cerebellum (x6.9).

NURSA nuclear receptor signaling pathways regulating expression of RPL17P29 Gene:

RPL17P29
genes like me logo Genes that share expression patterns with RPL17P29: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL17P29 Gene

Orthologs for RPL17P29 Gene

Evolution for RPL17P29 Gene

ENSEMBL:
Gene Tree for RPL17P29 (if available)
TreeFam:
Gene Tree for RPL17P29 (if available)

No data available for Orthologs for RPL17P29 Gene

Paralogs for RPL17P29 Gene

No data available for Paralogs for RPL17P29 Gene

Variants for RPL17P29 Gene

Relevant External Links for RPL17P29 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL17P29

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL17P29 Gene

Disorders for RPL17P29 Gene

Relevant External Links for RPL17P29

Genetic Association Database (GAD)
RPL17P29

No disorders were found for RPL17P29 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL17P29 Gene

Publications for RPL17P29 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 60
  2. Four novel Loci (19q13, 6q24, 12q24, and 5q14) influence the microcirculation in vivo. (PMID: 21060863) Ikram MK … Wong TY (PLoS genetics 2010) 45 60

Products for RPL17P29 Gene

Sources for RPL17P29 Gene

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