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Aliases for RPL17P27 Gene

Aliases for RPL17P27 Gene

  • Ribosomal Protein L17 Pseudogene 27 2 3
  • RPL17_17_857 3
  • AC020983.1 5

External Ids for RPL17P27 Gene

Previous GeneCards Identifiers for RPL17P27 Gene

  • GC07U902576
  • GC07P138380
  • GC07P138383
  • GC07P138387

Summaries for RPL17P27 Gene

GeneCards Summary for RPL17P27 Gene

RPL17P27 (Ribosomal Protein L17 Pseudogene 27) is a Pseudogene.

Additional gene information for RPL17P27 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL17P27 Gene

Genomics for RPL17P27 Gene

Regulatory Elements for RPL17P27 Gene

Enhancers for RPL17P27 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07H138661 0.9 ENCODE 0.3 -24.6 -24565 5 ELF3 HDGF PKNOX1 FOXA2 RARA RCOR1 KLF7 CEBPB REST PPARG RPL21P73 RPL17P27
GH07H138659 0.6 ENCODE 0.3 -30.8 -30829 0 SMARCE1 ZNF639 CTBP1 GATA3 CAVIN1 ZNF740 ID3 ZNF592 SVOPL UQCRFS1P2 ENSG00000201465 RPL21P73 RPL17P27
GH07H138667 0.5 ENCODE 0.3 -20.3 -20323 1 CAVIN1 NR4A1 POU5F1 KDM1A UQCRFS1P2 SVOPL ENSG00000252188 RPL17P27 RPL21P73
GH07H138658 0.5 ENCODE 0.3 -30.1 -30127 0 ZNF639 ZNF740 ID3 ZNF592 SVOPL UQCRFS1P2 ENSG00000201465 RPL21P73 RPL17P27
GH07H138649 0.5 ENCODE 0.3 -39.2 -39229 0 GTF3C2 EGR1 CEBPB EP300 LUC7L2 RPL21P73 RPL17P27
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL17P27 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL17P27 Gene

Chromosome:
7
Start:
138,688,939 bp from pter
End:
138,689,560 bp from pter
Size:
622 bases
Orientation:
Plus strand

Genomic View for RPL17P27 Gene

Genes around RPL17P27 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL17P27 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL17P27 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL17P27 Gene

Proteins for RPL17P27 Gene

Post-translational modifications for RPL17P27 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL17P27 Gene

Domains & Families for RPL17P27 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL17P27 Gene

Function for RPL17P27 Gene

Phenotypes for RPL17P27 Gene

GenomeRNAi human phenotypes for RPL17P27:
genes like me logo Genes that share phenotypes with RPL17P27: view

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPL17P27
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL17P27 Gene

Localization for RPL17P27 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL17P27 Gene

Pathways & Interactions for RPL17P27 Gene

SuperPathways for RPL17P27 Gene

No Data Available

Interacting Proteins for RPL17P27 Gene

Gene Ontology (GO) - Biological Process for RPL17P27 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL17P27 Gene

Drugs & Compounds for RPL17P27 Gene

No Compound Related Data Available

Transcripts for RPL17P27 Gene

mRNA/cDNA for RPL17P27 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPL17P27
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for RPL17P27 Gene

No ASD Table

Relevant External Links for RPL17P27 Gene

GeneLoc Exon Structure for
RPL17P27
ECgene alternative splicing isoforms for
RPL17P27

Expression for RPL17P27 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL17P27 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL17P27 Gene:

RPL17P27
genes like me logo Genes that share expression patterns with RPL17P27: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL17P27 Gene

Orthologs for RPL17P27 Gene

Evolution for RPL17P27 Gene

ENSEMBL:
Gene Tree for RPL17P27 (if available)
TreeFam:
Gene Tree for RPL17P27 (if available)

No data available for Orthologs for RPL17P27 Gene

Paralogs for RPL17P27 Gene

No data available for Paralogs for RPL17P27 Gene

Variants for RPL17P27 Gene

Relevant External Links for RPL17P27 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL17P27

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL17P27 Gene

Disorders for RPL17P27 Gene

Relevant External Links for RPL17P27

Genetic Association Database (GAD)
RPL17P27

No disorders were found for RPL17P27 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL17P27 Gene

Publications for RPL17P27 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 60
  2. Human chromosome 7: DNA sequence and biology. (PMID: 12690205) Scherer SW … Tsui LC (Science (New York, N.Y.) 2003) 3 60

Products for RPL17P27 Gene

Sources for RPL17P27 Gene

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