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Aliases for RPL17P22 Gene

Aliases for RPL17P22 Gene

  • Ribosomal Protein L17 Pseudogene 22 2 3 5
  • RPL17_13_564 3

External Ids for RPL17P22 Gene

Previous GeneCards Identifiers for RPL17P22 Gene

  • GC05P055469
  • GC05P052403

Summaries for RPL17P22 Gene

GeneCards Summary for RPL17P22 Gene

RPL17P22 (Ribosomal Protein L17 Pseudogene 22) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL17P22 Gene

Genomics for RPL17P22 Gene

Regulatory Elements for RPL17P22 Gene

Enhancers for RPL17P22 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH05G056125 1.2 Ensembl ENCODE dbSUPER 0.4 -9.4 -9368 3.5 SCRT1 SOX13 MXI1 RFX1 MAX NR3C1 EP300 RAD21 YY1 JUND ENSG00000238326 RNU6-299P RPL17P22
GH05G056142 1.2 ENCODE dbSUPER 0.4 +6.2 6190 1.4 PKNOX1 WRNIP1 SIN3A YY1 FOS SP3 TSHZ1 TBX21 ZNF610 NBN FLJ31104 IL6ST RNA5SP184 RPL17P22
GH05G056140 0.4 ENCODE 0.7 +3.2 3245 0.2 JUN FOS IL6ST FLJ31104 RPL17P22 RNA5SP184
GH05G056129 0.4 ENCODE 0.4 -7.4 -7426 0.1 POLR2A ENSG00000238326 RNU6-299P RPL17P22
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL17P22 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL17P22 Gene

Chromosome:
5
Start:
56,136,944 bp from pter
End:
56,137,578 bp from pter
Size:
635 bases
Orientation:
Plus strand

Genomic View for RPL17P22 Gene

Genes around RPL17P22 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL17P22 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL17P22 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL17P22 Gene

Proteins for RPL17P22 Gene

Post-translational modifications for RPL17P22 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL17P22 Gene

Domains & Families for RPL17P22 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL17P22 Gene

Function for RPL17P22 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL17P22 Gene

Localization for RPL17P22 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL17P22 Gene

Pathways & Interactions for RPL17P22 Gene

SuperPathways for RPL17P22 Gene

No Data Available

Interacting Proteins for RPL17P22 Gene

Gene Ontology (GO) - Biological Process for RPL17P22 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL17P22 Gene

Drugs & Compounds for RPL17P22 Gene

No Compound Related Data Available

Transcripts for RPL17P22 Gene

mRNA/cDNA for RPL17P22 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL17P22 Gene

No ASD Table

Relevant External Links for RPL17P22 Gene

GeneLoc Exon Structure for
RPL17P22
ECgene alternative splicing isoforms for
RPL17P22

Expression for RPL17P22 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL17P22 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL17P22 Gene:

RPL17P22
genes like me logo Genes that share expression patterns with RPL17P22: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL17P22 Gene

Orthologs for RPL17P22 Gene

Evolution for RPL17P22 Gene

ENSEMBL:
Gene Tree for RPL17P22 (if available)
TreeFam:
Gene Tree for RPL17P22 (if available)

No data available for Orthologs for RPL17P22 Gene

Paralogs for RPL17P22 Gene

No data available for Paralogs for RPL17P22 Gene

Variants for RPL17P22 Gene

Relevant External Links for RPL17P22 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL17P22

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL17P22 Gene

Disorders for RPL17P22 Gene

Relevant External Links for RPL17P22

Genetic Association Database (GAD)
RPL17P22

No disorders were found for RPL17P22 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL17P22 Gene

Publications for RPL17P22 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. Meta-analysis of genome-wide association studies in celiac disease and rheumatoid arthritis identifies fourteen non-HLA shared loci. (PMID: 21383967) Zhernakova A. … Plenge R.M. (PLoS Genet. 2011) 46 64

Products for RPL17P22 Gene

Sources for RPL17P22 Gene

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