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Aliases for RPL17P21 Gene

Subcategory (RNA class) for RPL17P21 Gene


Aliases for RPL17P21 Gene

  • Ribosomal Protein L17 Pseudogene 21 2 3
  • CTD-2207L17.1 5
  • RPL17_12_561 3

External Ids for RPL17P21 Gene

ORGUL Members for RPL17P21 Gene

Previous GeneCards Identifiers for RPL17P21 Gene

  • GC05U901114
  • GC05P052200

Summaries for RPL17P21 Gene

GeneCards Summary for RPL17P21 Gene

RPL17P21 (Ribosomal Protein L17 Pseudogene 21) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL17P21 Gene

Genomics for RPL17P21 Gene

Regulatory Elements for RPL17P21 Gene

Enhancers for RPL17P21 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH05F052899 0.2 ENCODE 0.8 -4.4 -4423 0.2 RPL17P21 B3GNTL1P1
GH05F052894 0.6 Ensembl ENCODE 0.4 -8.0 -8029 3.2 SMARCA4 HLF CEBPB ATF2 ITGA1 B3GNTL1P1 RPL17P21
GH05F052915 1.1 Ensembl ENCODE 0.4 +11.6 11562 0.8 CTCF PKNOX1 SAP130 TEAD4 RAD21 TEAD3 YY1 GTF3C2 GATA3 ZNF366 ITGA1 LOC105378963 PELO ENSG00000249899 ITGA2 RPL17P21
GH05F052893 0.6 Ensembl 0.4 -10.6 -10608 0.2 JUND BHLHE40 ITGA1 B3GNTL1P1 RPL17P21
GH05F052921 1.3 Ensembl ENCODE 0.3 +18.7 18747 1.4 TBP PKNOX1 INSM2 SIN3A RAD21 RFX5 ELK1 SCRT2 RCOR1 FOS ITGA1 RPL17P21 ITGA2
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RPL17P21 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL17P21 Gene

52,903,908 bp from pter
52,904,478 bp from pter
571 bases
Plus strand

Genomic View for RPL17P21 Gene

Genes around RPL17P21 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL17P21 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL17P21 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL17P21 Gene

Proteins for RPL17P21 Gene

Post-translational modifications for RPL17P21 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL17P21 Gene

Domains & Families for RPL17P21 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL17P21 Gene

Function for RPL17P21 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL17P21 Gene

Localization for RPL17P21 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL17P21 Gene

Pathways & Interactions for RPL17P21 Gene

SuperPathways for RPL17P21 Gene

No Data Available

Interacting Proteins for RPL17P21 Gene

Gene Ontology (GO) - Biological Process for RPL17P21 Gene


No data available for Pathways by source and SIGNOR curated interactions for RPL17P21 Gene

Transcripts for RPL17P21 Gene

mRNA/cDNA for RPL17P21 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL17P21 Gene

No ASD Table

Relevant External Links for RPL17P21 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for RPL17P21 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL17P21 Gene

mRNA differential expression in normal tissues according to GTEx for RPL17P21 Gene

This gene is overexpressed in Colon - Sigmoid (x4.2).

NURSA nuclear receptor signaling pathways regulating expression of RPL17P21 Gene:

genes like me logo Genes that share expression patterns with RPL17P21: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL17P21 Gene

Orthologs for RPL17P21 Gene

Evolution for RPL17P21 Gene

Gene Tree for RPL17P21 (if available)
Gene Tree for RPL17P21 (if available)

No data available for Orthologs for RPL17P21 Gene

Paralogs for RPL17P21 Gene

No data available for Paralogs for RPL17P21 Gene

Variants for RPL17P21 Gene

Relevant External Links for RPL17P21 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL17P21 Gene

Disorders for RPL17P21 Gene

No disorders were found for RPL17P21 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL17P21 Gene

Publications for RPL17P21 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL17P21 Gene

Sources for RPL17P21 Gene

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