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Aliases for RPL17P2 Gene

Subcategory (RNA class) for RPL17P2 Gene

lncRNA

Aliases for RPL17P2 Gene

  • Ribosomal Protein L17 Pseudogene 2 2 3 5
  • RPL17_13_1376 3

External Ids for RPL17P2 Gene

ORGUL Members for RPL17P2 Gene

Previous GeneCards Identifiers for RPL17P2 Gene

  • GC14U900554
  • GC14M060680

Summaries for RPL17P2 Gene

GeneCards Summary for RPL17P2 Gene

RPL17P2 (Ribosomal Protein L17 Pseudogene 2) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL17P2 Gene

Genomics for RPL17P2 Gene

Regulatory Elements for RPL17P2 Gene

Enhancers for RPL17P2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH14F060212 0.9 FANTOM5 0.8 +0.1 92 0.8 TBP PKNOX1 TBL1XR1 BMI1 EBF1 RELA POLR2A CREM CHD2 MAZ PPM1A LOC101927702 RPL17P2 GC14P060180
GH14F060204 1.4 FANTOM5 Ensembl ENCODE 0.4 +8.3 8278 1.4 HDGF TBP PKNOX1 MXI1 TBL1XR1 WRNIP1 BMI1 EBF1 RELA ZNF316 PPM1A LOC101927702 DHRS7 RPL17P2 GC14P060180
GH14F060183 1.2 Ensembl ENCODE 0.3 +28.8 28778 1.8 PKNOX1 FEZF1 ZNF121 ZNF143 ZNF263 TSHZ1 REST TBX21 MAFF PBX2 MAD2L1P1 LOC101927729 RTN1 PPM1A LOC101927702 C14orf39 GC14P060180 RPL17P2
GH14F060178 1.1 Ensembl ENCODE 0.3 +33.2 33203 1.6 PKNOX1 ZNF76 SIN3A ARID4B RAD21 YY1 ZNF335 ZNF263 ZBTB11 JUNB PPM1A RTN1 LOC101927702 PCNX4 C14orf39 GC14P060180 RPL17P2
GH14F060197 0.6 Ensembl 0.3 +15.1 15054 0.6 PKNOX1 JUN NFYC FOS FOSL2 PCNX4 RPL17P2 GC14P060180
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL17P2 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL17P2 Gene

Chromosome:
14
Start:
60,212,453 bp from pter
End:
60,212,954 bp from pter
Size:
502 bases
Orientation:
Minus strand

Genomic View for RPL17P2 Gene

Genes around RPL17P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL17P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL17P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL17P2 Gene

Proteins for RPL17P2 Gene

Post-translational modifications for RPL17P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL17P2 Gene

Domains & Families for RPL17P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL17P2 Gene

Function for RPL17P2 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL17P2 Gene

Localization for RPL17P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL17P2 Gene

Pathways & Interactions for RPL17P2 Gene

SuperPathways for RPL17P2 Gene

No Data Available

Interacting Proteins for RPL17P2 Gene

Gene Ontology (GO) - Biological Process for RPL17P2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL17P2 Gene

Transcripts for RPL17P2 Gene

mRNA/cDNA for RPL17P2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL17P2 Gene

No ASD Table

Relevant External Links for RPL17P2 Gene

GeneLoc Exon Structure for
RPL17P2
ECgene alternative splicing isoforms for
RPL17P2

Expression for RPL17P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL17P2 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL17P2 Gene:

RPL17P2
genes like me logo Genes that share expression patterns with RPL17P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL17P2 Gene

Orthologs for RPL17P2 Gene

Evolution for RPL17P2 Gene

ENSEMBL:
Gene Tree for RPL17P2 (if available)
TreeFam:
Gene Tree for RPL17P2 (if available)

No data available for Orthologs for RPL17P2 Gene

Paralogs for RPL17P2 Gene

No data available for Paralogs for RPL17P2 Gene

Variants for RPL17P2 Gene

Relevant External Links for RPL17P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL17P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL17P2 Gene

Disorders for RPL17P2 Gene

Relevant External Links for RPL17P2

Genetic Association Database (GAD)
RPL17P2

No disorders were found for RPL17P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL17P2 Gene

Publications for RPL17P2 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. A genome-wide meta-analysis of genetic variants associated with allergic rhinitis and grass sensitization and their interaction with birth order. (PMID: 22036096) Ramasamy A. … Jarvis D.L. (J. Allergy Clin. Immunol. 2011) 46 64

Products for RPL17P2 Gene

Sources for RPL17P2 Gene

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