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Aliases for RPL17P17 Gene

Aliases for RPL17P17 Gene

  • Ribosomal Protein L17 Pseudogene 17 2 3 5
  • RPL17_9_379 3

External Ids for RPL17P17 Gene

Previous GeneCards Identifiers for RPL17P17 Gene

  • GC03U901191

Summaries for RPL17P17 Gene

GeneCards Summary for RPL17P17 Gene

RPL17P17 (Ribosomal Protein L17 Pseudogene 17) is a Pseudogene.

Additional gene information for RPL17P17 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL17P17 Gene

Genomics for RPL17P17 Gene

Regulatory Elements for RPL17P17 Gene

Enhancers for RPL17P17 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03H065833 0.6 Ensembl ENCODE 0.4 -9.7 -9738 1.1 JUND MAGI1-AS1 RPL17P17 LOC105377130
GH03H065836 0.6 Ensembl 0.4 -7.7 -7662 0.4 ZBTB21 JUN ATF2 ZNF629 FOS ZNF548 ATF7 PRDM10 ZNF600 MAGI1-AS1 RPL17P17 LOC105377130
GH03H065831 0.6 ENCODE 0.4 -11.9 -11937 1.2 ZFP69B JUND ZNF692 CEBPA HLF ZNF7 MAGI1-AS1 MAGI1 RPL17P17 LOC105377130
GH03H065729 1.2 Ensembl ENCODE 0.1 -113.9 -113899 1.6 ELF3 FOXA2 ARID4B RAD21 RARA YY1 CREM MIXL1 HMG20B MXD4 LOC105377130 RPL17P17
GH03H065784 0.5 ENCODE 0.2 -59.5 -59502 0.2 GATA3 JUND POLR2A FOS RFX5 RPL17P17 LOC105377130
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL17P17 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL17P17 Gene

Genomic Locations for RPL17P17 Gene
chr3:65,843,862-65,844,474
(GRCh38/hg38)
Size:
613 bases
Orientation:
Plus strand
chr3:65,829,537-65,830,149
(GRCh37/hg19)

Genomic View for RPL17P17 Gene

Genes around RPL17P17 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL17P17 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL17P17 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL17P17 Gene

Proteins for RPL17P17 Gene

Post-translational modifications for RPL17P17 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL17P17 Gene

Domains & Families for RPL17P17 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL17P17 Gene

Function for RPL17P17 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL17P17 Gene

Localization for RPL17P17 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL17P17 Gene

Pathways & Interactions for RPL17P17 Gene

SuperPathways for RPL17P17 Gene

No Data Available

Interacting Proteins for RPL17P17 Gene

Gene Ontology (GO) - Biological Process for RPL17P17 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL17P17 Gene

Drugs & Compounds for RPL17P17 Gene

No Compound Related Data Available

Transcripts for RPL17P17 Gene

mRNA/cDNA for RPL17P17 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL17P17 Gene

No ASD Table

Relevant External Links for RPL17P17 Gene

GeneLoc Exon Structure for
RPL17P17
ECgene alternative splicing isoforms for
RPL17P17

Expression for RPL17P17 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL17P17 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL17P17 Gene:

RPL17P17
genes like me logo Genes that share expression patterns with RPL17P17: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL17P17 Gene

Orthologs for RPL17P17 Gene

Evolution for RPL17P17 Gene

ENSEMBL:
Gene Tree for RPL17P17 (if available)
TreeFam:
Gene Tree for RPL17P17 (if available)

No data available for Orthologs for RPL17P17 Gene

Paralogs for RPL17P17 Gene

No data available for Paralogs for RPL17P17 Gene

Variants for RPL17P17 Gene

Relevant External Links for RPL17P17 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL17P17

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL17P17 Gene

Disorders for RPL17P17 Gene

No disorders were found for RPL17P17 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL17P17 Gene

Publications for RPL17P17 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 60

Products for RPL17P17 Gene

Sources for RPL17P17 Gene

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