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RPL15P21 Gene(Pseudogene)

Ribosomal Protein L15 Pseudogene 21

GCID:
GC17M010860
GIFtS:
11
Genes Participants
UDN Logo

Aliases for RPL15P21 Gene

Aliases for RPL15P21 Gene

  • Ribosomal Protein L15 Pseudogene 21 2 3 5
  • RPL15_8_1514 3

External Ids for RPL15P21 Gene

Previous GeneCards Identifiers for RPL15P21 Gene

  • GC17M010705
  • GC17M010706
  • GC17M010764
  • GC17M010765
  • GC17M010768
  • GC17M010770

Summaries for RPL15P21 Gene

GeneCards Summary for RPL15P21 Gene

RPL15P21 (Ribosomal Protein L15 Pseudogene 21) is a Pseudogene.

Additional gene information for RPL15P21 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL15P21 Gene

Genomics for RPL15P21 Gene

Products:

  1. Regulatory Element

GeneHancer (GH) Regulatory Elements for RPL15P21 Gene

Promoters and enhancers for RPL15P21 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH17I010789 Enhancer 1.2 Ensembl ENCODE dbSUPER 11.3 +70.1 70129 3.7 SMAD1 TAF9B RAD21 YY1 POLR2B SCRT2 SMAD5 RXRA GTF2B NR2F2 ENSG00000266114 ADPRM SCO1 RNU6-1065P RPL15P21 MYH3 ENSG00000263508 TMEM220-AS1 GC17M010779
GH17I010736 Enhancer 1 ENCODE dbSUPER 11.7 +123.1 123104 3.7 ELF3 FOXA2 KLF17 THRB RAD21 RARA YY1 ZNF366 ZNF143 ZNF654 TMEM220 RNU6-1065P RPL15P21 SCO1 ADPRM MYH3 TMEM220-AS1 ENSG00000264016 ENSG00000240813
GH17I010784 Enhancer 0.7 ENCODE dbSUPER 11.3 +75.2 75239 3.4 CTBP1 HLF DPF2 FOS ADPRM RNU6-1065P RPL15P21 MYH3 SCO1 TMEM220 TMEM220-AS1 ENSG00000266114 GC17M010779
GH17I010842 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 5.1 +17.3 17273 3.3 CTCF KLF1 RAD21 ZFHX2 GLIS2 ZBTB48 EGR1 PATZ1 VEZF1 SMC3 RPL15P21 GC17P010841 ENSG00000263508
GH17I010814 Enhancer 0.6 dbSUPER 11.7 +46.4 46440 1.7 SMARCE1 ESRRA ZNF687 RFX1 DPF2 MNT KLF4 ZBTB7B ZBTB40 ZNF592 RNU6-1065P RPL15P21 MYH3 ADPRM SCO1 TMEM220-AS1 ENSG00000279542 TMEM238L
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL15P21 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL15P21 Gene

Genomic Locations for RPL15P21 Gene
chr17:10,860,531-10,861,462
(GRCh38/hg38)
Size:
932 bases
Orientation:
Minus strand
chr17:10,763,848-10,764,779
(GRCh37/hg19)

Genomic View for RPL15P21 Gene

Genes around RPL15P21 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL15P21 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL15P21 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for RPL15P21 Gene

Proteins for RPL15P21 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for RPL15P21 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL15P21 Gene

Domains & Families for RPL15P21 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL15P21 Gene

Function for RPL15P21 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for RPL15P21 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL15P21 Gene

Localization for RPL15P21 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL15P21 Gene

Pathways & Interactions for RPL15P21 Gene

SuperPathways for RPL15P21 Gene

PathCards logo More details on SuperPathways for RPL15P21
No Data Available

Interacting Proteins for RPL15P21 Gene

Gene Ontology (GO) - Biological Process for RPL15P21 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL15P21 Gene

Drugs & Compounds for RPL15P21 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for RPL15P21 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for RPL15P21 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL15P21 Gene

No ASD Table

Relevant External Links for RPL15P21 Gene

GeneLoc Exon Structure for
RPL15P21
ECgene alternative splicing isoforms for
RPL15P21

Expression for RPL15P21 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL15P21 Gene

mRNA expression in normal human tissues for RPL15P21 Gene
mRNA expression by GTEx for RPL15P21 Gene

mRNA differential expression in normal tissues according to GTEx for RPL15P21 Gene

This gene is overexpressed in Colon - Transverse (x11.0) and Minor Salivary Gland (x7.7).

NURSA nuclear receptor signaling pathways regulating expression of RPL15P21 Gene:

RPL15P21
genes like me logo Genes that share expression patterns with RPL15P21: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL15P21 Gene

Orthologs for RPL15P21 Gene

Evolution for RPL15P21 Gene

ENSEMBL:
Gene Tree for RPL15P21 (if available)
TreeFam:
Gene Tree for RPL15P21 (if available)

No data available for Orthologs for RPL15P21 Gene

Paralogs for RPL15P21 Gene

No data available for Paralogs for RPL15P21 Gene

Variants for RPL15P21 Gene

Additional Variant Information for RPL15P21 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL15P21

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL15P21 Gene

Disorders for RPL15P21 Gene

Additional Disease Information for RPL15P21

Genetic Association Database
(GAD)

No disorders were found for RPL15P21 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL15P21 Gene

Publications for RPL15P21 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58
  2. Genome-wide association with bone mass and geometry in the Framingham Heart Study. (PMID: 17903296) Kiel DP … Karasik D (BMC medical genetics 2007) 44 58

Products for RPL15P21 Gene

Sources for RPL15P21 Gene

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