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Aliases for RPL15P16 Gene

Subcategory (RNA class) for RPL15P16 Gene

antisense

Aliases for RPL15P16 Gene

  • Ribosomal Protein L15 Pseudogene 16 2 3
  • RPL15_9_1154 3
  • AP002381.2 5

External Ids for RPL15P16 Gene

ORGUL Members for RPL15P16 Gene

Previous GeneCards Identifiers for RPL15P16 Gene

  • GC11P072330
  • GC11P072652

Summaries for RPL15P16 Gene

GeneCards Summary for RPL15P16 Gene

RPL15P16 (Ribosomal Protein L15 Pseudogene 16) is a Pseudogene, and is affiliated with the antisense RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL15P16 Gene

Genomics for RPL15P16 Gene

Regulatory Elements for RPL15P16 Gene

Enhancers for RPL15P16 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH11G072935 1 Ensembl ENCODE dbSUPER 0.7 -4.7 -4698 0.8 RAD51 SCRT2 USF2 RNU6-672P FCHSD2 RPL15P16 GC11P072924
GH11G072950 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +11.7 11721 3.8 BCOR HDGF ZMYM3 MAX RAD21 ZKSCAN1 RELA ZNF600 RELB IKZF2 FCHSD2 RNU6-672P ATG16L2 RELT STARD10 ARAP1 RPL15P16 GC11M072974
GH11G072941 0.9 dbSUPER 0.7 +2.3 2319 2.8 HDAC1 PKNOX1 ARNT TCF12 ZNF121 GATA2 ZBTB2 ZEB2 MBD2 NFIC FCHSD2 RPL15P16 GC11M072974
GH11G072974 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +35.0 35003 3.0 CTCF BHLHE40 CEBPB MAX SIN3A JUNB CEBPG EP300 FOSL1 JUND FCHSD2 RNU6-672P RELT GC11M072974 RPL15P16
GH11G072969 1.4 Ensembl ENCODE dbSUPER 0.3 +30.0 30031 2.7 HDAC1 TBP PKNOX1 TBL1XR1 AGO1 BMI1 FEZF1 EGR1 RELB ETV6 FCHSD2 STARD10 GC11M072974 RPL15P16
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL15P16 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL15P16 Gene

Chromosome:
11
Start:
72,940,498 bp from pter
End:
72,941,112 bp from pter
Size:
615 bases
Orientation:
Plus strand

Genomic View for RPL15P16 Gene

Genes around RPL15P16 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL15P16 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL15P16 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL15P16 Gene

Proteins for RPL15P16 Gene

Post-translational modifications for RPL15P16 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL15P16 Gene

Domains & Families for RPL15P16 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL15P16 Gene

Function for RPL15P16 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL15P16 Gene

Localization for RPL15P16 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL15P16 Gene

Pathways & Interactions for RPL15P16 Gene

SuperPathways for RPL15P16 Gene

No Data Available

Interacting Proteins for RPL15P16 Gene

Gene Ontology (GO) - Biological Process for RPL15P16 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL15P16 Gene

Drugs & Compounds for RPL15P16 Gene

No Compound Related Data Available

Transcripts for RPL15P16 Gene

mRNA/cDNA for RPL15P16 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL15P16 Gene

No ASD Table

Relevant External Links for RPL15P16 Gene

GeneLoc Exon Structure for
RPL15P16
ECgene alternative splicing isoforms for
RPL15P16

Expression for RPL15P16 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL15P16 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL15P16 Gene:

RPL15P16
genes like me logo Genes that share expression patterns with RPL15P16: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL15P16 Gene

Orthologs for RPL15P16 Gene

Evolution for RPL15P16 Gene

ENSEMBL:
Gene Tree for RPL15P16 (if available)
TreeFam:
Gene Tree for RPL15P16 (if available)

No data available for Orthologs for RPL15P16 Gene

Paralogs for RPL15P16 Gene

No data available for Paralogs for RPL15P16 Gene

Variants for RPL15P16 Gene

Relevant External Links for RPL15P16 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL15P16

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL15P16 Gene

Disorders for RPL15P16 Gene

Relevant External Links for RPL15P16

Genetic Association Database (GAD)
RPL15P16

No disorders were found for RPL15P16 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL15P16 Gene

Publications for RPL15P16 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL15P16 Gene

Sources for RPL15P16 Gene

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