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Aliases for RPL15P15 Gene

Subcategory (RNA class) for RPL15P15 Gene

lncRNA

Aliases for RPL15P15 Gene

  • Ribosomal Protein L15 Pseudogene 15 2 3
  • RPL15_4_1179 3
  • AP000797.2 5

External Ids for RPL15P15 Gene

ORGUL Members for RPL15P15 Gene

Previous GeneCards Identifiers for RPL15P15 Gene

  • GC11M115327
  • GC11M115822

Summaries for RPL15P15 Gene

GeneCards Summary for RPL15P15 Gene

RPL15P15 (Ribosomal Protein L15 Pseudogene 15) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for RPL15P15 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL15P15 Gene

Genomics for RPL15P15 Gene

GeneHancer (GH) Regulatory Elements for RPL15P15 Gene

Promoters and enhancers for RPL15P15 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11I115940 Enhancer 1 Ensembl ENCODE 0.4 +8.9 8948 2 NCOA3 CTCF CLOCK TEAD4 JUN MAX FOSL1 TCF12 GATA3 CBFA2T2 LOC102724165 RPL15P15
GH11I115930 Enhancer 0.9 Ensembl ENCODE 0.4 +19.5 19478 1.3 TAL1 EBF1 ZIC2 TCF12 CBFA2T2 BCLAF1 IKZF2 RUNX3 ZNF687 NR2F1 LOC102724165 RPL15P15
GH11I115924 Enhancer 1.1 FANTOM5 ENCODE 0.3 +25.6 25558 0.9 HDGF PKNOX1 RB1 BMI1 BATF KLF5 IRF4 ZNF207 ZNF143 ATF7 LOC102724165 RPL15P15
GH11I115918 Enhancer 1.1 FANTOM5 ENCODE 0.3 +30.8 30832 3.1 PKNOX1 SMAD1 BATF KLF5 IRF4 ZNF207 ZNF350 ZNF143 ATF7 ETV6 LOC102724165 BUD13 RPL15P15
GH11I115939 Enhancer 0.7 ENCODE 0.4 +10.9 10887 0.1 HDGF PKNOX1 EBF1 POLR2A CBFA2T2 ATF7 IKZF2 RUNX3 EGR2 NR2F1 RPL15P15 LOC102724165
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL15P15 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL15P15 Gene

Genomic Locations for RPL15P15 Gene
chr11:115,950,190-115,950,801
(GRCh38/hg38)
Size:
612 bases
Orientation:
Minus strand
chr11:115,820,908-115,821,519
(GRCh37/hg19)

Genomic View for RPL15P15 Gene

Genes around RPL15P15 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL15P15 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL15P15 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL15P15 Gene

Proteins for RPL15P15 Gene

Post-translational modifications for RPL15P15 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL15P15 Gene

Domains & Families for RPL15P15 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL15P15 Gene

Function for RPL15P15 Gene

Phenotypes From GWAS Catalog for RPL15P15 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL15P15 Gene

Localization for RPL15P15 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL15P15 Gene

Pathways & Interactions for RPL15P15 Gene

SuperPathways for RPL15P15 Gene

No Data Available

Interacting Proteins for RPL15P15 Gene

Gene Ontology (GO) - Biological Process for RPL15P15 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL15P15 Gene

Drugs & Compounds for RPL15P15 Gene

No Compound Related Data Available

Transcripts for RPL15P15 Gene

mRNA/cDNA for RPL15P15 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL15P15 Gene

No ASD Table

Relevant External Links for RPL15P15 Gene

GeneLoc Exon Structure for
RPL15P15
ECgene alternative splicing isoforms for
RPL15P15

Expression for RPL15P15 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL15P15 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL15P15 Gene:

RPL15P15
genes like me logo Genes that share expression patterns with RPL15P15: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL15P15 Gene

Orthologs for RPL15P15 Gene

Evolution for RPL15P15 Gene

ENSEMBL:
Gene Tree for RPL15P15 (if available)
TreeFam:
Gene Tree for RPL15P15 (if available)

No data available for Orthologs for RPL15P15 Gene

Paralogs for RPL15P15 Gene

No data available for Paralogs for RPL15P15 Gene

Variants for RPL15P15 Gene

Additional Variant Information for RPL15P15 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL15P15

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL15P15 Gene

Disorders for RPL15P15 Gene

Additional Disease Information for RPL15P15

Genetic Association Database
(GAD)

No disorders were found for RPL15P15 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL15P15 Gene

Publications for RPL15P15 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58
  2. Common human genetic variants and HIV-1 susceptibility: a genome-wide survey in a homogeneous African population. (PMID: 21160409) Petrovski S … Center for HIV/AIDS Vaccine Immunology (AIDS (London, England) 2011) 44 58
  3. Large-scale genome-wide association studies in East Asians identify new genetic loci influencing metabolic traits. (PMID: 21909109) Kim YJ … Cho YS (Nature genetics 2011) 44 58
  4. Voxelwise genome-wide association study (vGWAS). (PMID: 20171287) Stein JL … Alzheimer's Disease Neuroimaging Initiative (NeuroImage 2010) 44 58
  5. Genome-wide association study of hematological and biochemical traits in a Japanese population. (PMID: 20139978) Kamatani Y … Kamatani N (Nature genetics 2010) 44 58

Products for RPL15P15 Gene

Sources for RPL15P15 Gene

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