Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RPL15P11 Gene

Aliases for RPL15P11 Gene

  • Ribosomal Protein L15 Pseudogene 11 2 3
  • RPL15_5_851 3
  • AC093107.7 5

External Ids for RPL15P11 Gene

Previous GeneCards Identifiers for RPL15P11 Gene

  • GC07P134999
  • GC07P135346

Summaries for RPL15P11 Gene

GeneCards Summary for RPL15P11 Gene

RPL15P11 (Ribosomal Protein L15 Pseudogene 11) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL15P11 Gene

Genomics for RPL15P11 Gene

Regulatory Elements for RPL15P11 Gene

Enhancers for RPL15P11 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07G135661 1.4 ENCODE dbSUPER 21.9 +3.1 3083 3.8 CREB3L1 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 ZNF263 SP3 NFYC ZNF610 C7orf73 RPL15P11 ENSG00000273219 RNU6-1154P GC07M135666
GH07G135650 1.5 Ensembl ENCODE dbSUPER 19.8 -9.0 -9013 0.9 PKNOX1 ATF1 ARID4B SIN3A ZBTB7B SLC30A9 ZNF766 GATA2 ZNF143 NCOA1 RPL15P11 ENSG00000273219 GC07P135651
GH07G135672 1.2 Ensembl ENCODE dbSUPER 22.8 +13.2 13169 1.7 CTCF TFAP4 ARNT CHD7 RAD21 ZNF664 SMC3 FOS STAT1 ZNF654 C7orf73 RPL15P11 FAM180A C7orf49 GC07P135677 RNU6-1154P GC07M135666
GH07G135743 1.7 FANTOM5 Ensembl ENCODE dbSUPER 14.7 +85.3 85268 3.3 PKNOX1 ATF1 ZSCAN4 YBX1 ZBTB40 GATA2 FOS CREM ZBTB11 ELF4 C7orf73 RPL15P11 FAM180A ENSG00000224746 SLC13A4
GH07G135669 1.1 Ensembl ENCODE dbSUPER 21.7 +10.4 10412 1.8 HLF MAFG CEBPG ZNF316 JUND GATA3 ATF3 MAFK EMSY RPL15P11 C7orf73 FAM180A RNU6-1154P GC07M135666 GC07P135677
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL15P11 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL15P11 Gene

Chromosome:
7
Start:
135,660,038 bp from pter
End:
135,660,652 bp from pter
Size:
615 bases
Orientation:
Plus strand

Genomic View for RPL15P11 Gene

Genes around RPL15P11 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL15P11 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL15P11 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL15P11 Gene

Proteins for RPL15P11 Gene

Post-translational modifications for RPL15P11 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL15P11 Gene

Domains & Families for RPL15P11 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL15P11 Gene

Function for RPL15P11 Gene

Phenotypes for RPL15P11 Gene

GenomeRNAi human phenotypes for RPL15P11:
genes like me logo Genes that share phenotypes with RPL15P11: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL15P11 Gene

Localization for RPL15P11 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL15P11 Gene

Pathways & Interactions for RPL15P11 Gene

SuperPathways for RPL15P11 Gene

No Data Available

Interacting Proteins for RPL15P11 Gene

Gene Ontology (GO) - Biological Process for RPL15P11 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL15P11 Gene

Transcripts for RPL15P11 Gene

mRNA/cDNA for RPL15P11 Gene

(1) REFSEQ mRNAs :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL15P11 Gene

No ASD Table

Relevant External Links for RPL15P11 Gene

GeneLoc Exon Structure for
RPL15P11
ECgene alternative splicing isoforms for
RPL15P11

Expression for RPL15P11 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL15P11 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL15P11 Gene:

RPL15P11
genes like me logo Genes that share expression patterns with RPL15P11: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL15P11 Gene

Orthologs for RPL15P11 Gene

Evolution for RPL15P11 Gene

ENSEMBL:
Gene Tree for RPL15P11 (if available)
TreeFam:
Gene Tree for RPL15P11 (if available)

No data available for Orthologs for RPL15P11 Gene

Paralogs for RPL15P11 Gene

No data available for Paralogs for RPL15P11 Gene

Variants for RPL15P11 Gene

Relevant External Links for RPL15P11 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL15P11

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL15P11 Gene

Disorders for RPL15P11 Gene

No disorders were found for RPL15P11 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL15P11 Gene

Publications for RPL15P11 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. Human chromosome 7: DNA sequence and biology. (PMID: 12690205) Scherer S.W. … Tsui L.-C. (Science 2003) 3 64

Products for RPL15P11 Gene

Sources for RPL15P11 Gene

Content
Loading form....