Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RPL13P6 Gene

Aliases for RPL13P6 Gene

  • Ribosomal Protein L13 Pseudogene 6 2 3 5
  • Ribosomal Protein L13a Pseudogene 4 2 3
  • RPL13_5_1409 3
  • RPL13AP4 3

External Ids for RPL13P6 Gene

Previous HGNC Symbols for RPL13P6 Gene

  • RPL13AP4

Previous GeneCards Identifiers for RPL13P6 Gene

  • GC14P102580
  • GC14P103508
  • GC14P083682

Summaries for RPL13P6 Gene

GeneCards Summary for RPL13P6 Gene

RPL13P6 (Ribosomal Protein L13 Pseudogene 6) is a Pseudogene.

Additional gene information for RPL13P6 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL13P6 Gene

Genomics for RPL13P6 Gene

GeneHancer (GH) Regulatory Elements for RPL13P6 Gene

Promoters and enhancers for RPL13P6 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14I103054 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE dbSUPER 0.4 +15.3 15302 3.9 FOXA2 ARID4B SIN3A DMAP1 ZBTB7B ZNF48 GLIS2 ELK1 ZNF143 SP3 GC14P103274 CDC42BPB RPL13P6
GH14I103045 Enhancer 0.8 ENCODE dbSUPER 0.8 +4.2 4207 0.6 MAX REST DPF2 IKZF1 NBN ZNF143 RUNX3 IKZF2 SPI1 RPL13P6 CDC42BPB
GH14I103023 Enhancer 1.2 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -17.1 -17076 2.1 ZNF121 POLR2A JUN MAX ZNF600 GABPA ZBTB17 GC14M102996 RPL13P6 CDC42BPB
GH14I103021 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 -19.1 -19068 1.5 KLF1 ZNF223 FEZF1 ZIC2 ZNF335 ZFHX2 GLIS2 FOXK2 PATZ1 SCRT2 XRCC3 RCOR1 GC14M102996 RPL13P6 CDC42BPB
GH14I103033 Enhancer 1 Ensembl ENCODE 0.4 -7.5 -7502 0.9 PKNOX1 ZBTB6 ZNF529 MZF1 FEZF1 ZNF2 BCL11B ZNF335 GATA3 ZNF366 CDC42BPB MOK APOPT1 RPL13P6 GC14M102996
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL13P6 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL13P6 Gene

Genomic Locations for RPL13P6 Gene
chr14:103,041,469-103,042,094
(GRCh38/hg38)
Size:
626 bases
Orientation:
Plus strand
chr14:103,507,806-103,508,431
(GRCh37/hg19)

Genomic View for RPL13P6 Gene

Genes around RPL13P6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL13P6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL13P6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL13P6 Gene

Proteins for RPL13P6 Gene

Post-translational modifications for RPL13P6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL13P6 Gene

Domains & Families for RPL13P6 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL13P6 Gene

Function for RPL13P6 Gene

Phenotypes From GWAS Catalog for RPL13P6 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL13P6 Gene

Localization for RPL13P6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL13P6 Gene

Pathways & Interactions for RPL13P6 Gene

SuperPathways for RPL13P6 Gene

No Data Available

Interacting Proteins for RPL13P6 Gene

Gene Ontology (GO) - Biological Process for RPL13P6 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL13P6 Gene

Drugs & Compounds for RPL13P6 Gene

No Compound Related Data Available

Transcripts for RPL13P6 Gene

mRNA/cDNA for RPL13P6 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL13P6 Gene

No ASD Table

Relevant External Links for RPL13P6 Gene

GeneLoc Exon Structure for
RPL13P6
ECgene alternative splicing isoforms for
RPL13P6

Expression for RPL13P6 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL13P6 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL13P6 Gene:

RPL13P6
genes like me logo Genes that share expression patterns with RPL13P6: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL13P6 Gene

Orthologs for RPL13P6 Gene

Evolution for RPL13P6 Gene

ENSEMBL:
Gene Tree for RPL13P6 (if available)
TreeFam:
Gene Tree for RPL13P6 (if available)

No data available for Orthologs for RPL13P6 Gene

Paralogs for RPL13P6 Gene

No data available for Paralogs for RPL13P6 Gene

Variants for RPL13P6 Gene

Additional Variant Information for RPL13P6 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL13P6

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL13P6 Gene

Disorders for RPL13P6 Gene

Additional Disease Information for RPL13P6

Genetic Association Database
(GAD)

No disorders were found for RPL13P6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL13P6 Gene

Publications for RPL13P6 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58
  2. Genome-wide association study identifies 12 new susceptibility loci for primary biliary cirrhosis. (PMID: 21399635) Mells GF … Anderson CA (Nature genetics 2011) 44 58

Products for RPL13P6 Gene

Sources for RPL13P6 Gene

Content
Loading form....