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Aliases for RPL13P6 Gene

Aliases for RPL13P6 Gene

  • Ribosomal Protein L13 Pseudogene 6 2 3 5
  • Ribosomal Protein L13a Pseudogene 4 2 3
  • RPL13_5_1409 3
  • RPL13AP4 3

External Ids for RPL13P6 Gene

Previous HGNC Symbols for RPL13P6 Gene

  • RPL13AP4

Previous GeneCards Identifiers for RPL13P6 Gene

  • GC14P102580
  • GC14P103508
  • GC14P083682

Summaries for RPL13P6 Gene

GeneCards Summary for RPL13P6 Gene

RPL13P6 (Ribosomal Protein L13 Pseudogene 6) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL13P6 Gene

Genomics for RPL13P6 Gene

Regulatory Elements for RPL13P6 Gene

Enhancers for RPL13P6 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH14F103045 1 Ensembl ENCODE 0.8 +4.4 4405 1.1 MXI1 USF1 SIN3A MAX ZBTB40 ZNF143 CREM MAZ MTA2 NFIA RPL13P6 CDC42BPB
GH14F103033 1.1 Ensembl ENCODE 0.4 -7.5 -7502 0.9 PKNOX1 ARID4B FEZF1 RAD21 ZNF2 ZNF48 ZNF366 ZNF143 CREM ZNF654 CDC42BPB ENSG00000269940 XRCC3 APOPT1 RPL13P6 GC14M102996
GH14F103021 1.4 FANTOM5 Ensembl ENCODE 0.3 -17.9 -17932 3.8 KLF1 JUN ZNF223 FEZF1 ZIC2 ZNF121 ZFHX2 GLIS2 POLR2A PATZ1 XRCC3 RCOR1 GC14M102996 RPL13P6
GH14F103054 1.1 ENCODE 0.3 +15.3 15303 3.9 HDGF ARID4B SIN3A FEZF1 DMAP1 ZNF2 ZNF302 ZNF143 ZNF416 ZNF548 XRCC3 RPL23AP11 CDC42BPB BAG5 RCOR1 RPL13P6
GH14F103014 1 Ensembl ENCODE 0.3 -26.1 -26069 2.4 HDGF ZIC2 ZEB1 ZFHX2 PRDM10 ETV6 MTA2 JUNB ZEB2 ZBTB8A TRAF3 ENSG00000246451 GC14M102996 RPL13P6
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL13P6 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL13P6 Gene

Chromosome:
14
Start:
103,041,469 bp from pter
End:
103,042,094 bp from pter
Size:
626 bases
Orientation:
Plus strand

Genomic View for RPL13P6 Gene

Genes around RPL13P6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL13P6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL13P6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL13P6 Gene

Proteins for RPL13P6 Gene

Post-translational modifications for RPL13P6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL13P6 Gene

Domains & Families for RPL13P6 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL13P6 Gene

Function for RPL13P6 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL13P6 Gene

Localization for RPL13P6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL13P6 Gene

Pathways & Interactions for RPL13P6 Gene

SuperPathways for RPL13P6 Gene

No Data Available

Interacting Proteins for RPL13P6 Gene

Gene Ontology (GO) - Biological Process for RPL13P6 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL13P6 Gene

Transcripts for RPL13P6 Gene

mRNA/cDNA for RPL13P6 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL13P6 Gene

No ASD Table

Relevant External Links for RPL13P6 Gene

GeneLoc Exon Structure for
RPL13P6
ECgene alternative splicing isoforms for
RPL13P6

Expression for RPL13P6 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL13P6 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL13P6 Gene:

RPL13P6
genes like me logo Genes that share expression patterns with RPL13P6: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL13P6 Gene

Orthologs for RPL13P6 Gene

Evolution for RPL13P6 Gene

ENSEMBL:
Gene Tree for RPL13P6 (if available)
TreeFam:
Gene Tree for RPL13P6 (if available)

No data available for Orthologs for RPL13P6 Gene

Paralogs for RPL13P6 Gene

No data available for Paralogs for RPL13P6 Gene

Variants for RPL13P6 Gene

Relevant External Links for RPL13P6 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL13P6

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL13P6 Gene

Disorders for RPL13P6 Gene

Relevant External Links for RPL13P6

Genetic Association Database (GAD)
RPL13P6

No disorders were found for RPL13P6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL13P6 Gene

Publications for RPL13P6 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. Genome-wide association study identifies 12 new susceptibility loci for primary biliary cirrhosis. (PMID: 21399635) Mells G.F. … Anderson C.A. (Nat. Genet. 2011) 46 64

Products for RPL13P6 Gene

Sources for RPL13P6 Gene

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