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Aliases for RPL13P2 Gene

Aliases for RPL13P2 Gene

  • Ribosomal Protein L13 Pseudogene 2 2 3 5
  • Ribosomal Protein L13 Pseudogene 3 2 3
  • RPL13_7_1707 3
  • DJ599F21.2 3
  • RPL13P3 3

External Ids for RPL13P2 Gene

Previous HGNC Symbols for RPL13P2 Gene

  • RPL13P3

Previous GeneCards Identifiers for RPL13P2 Gene

  • GC20U990083
  • GC20P045366
  • GC20P045413
  • GC20P044161
  • GC20P044728
  • GC20P041469

Summaries for RPL13P2 Gene

GeneCards Summary for RPL13P2 Gene

RPL13P2 (Ribosomal Protein L13 Pseudogene 2) is a Pseudogene.

Additional gene information for RPL13P2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL13P2 Gene

Genomics for RPL13P2 Gene

Regulatory Elements for RPL13P2 Gene

Enhancers for RPL13P2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH20H045334 2 FANTOM5 Ensembl ENCODE dbSUPER 14.6 -757.4 -757395 14 MLX ZFP64 DMAP1 YY1 ZNF143 SP3 NFYC ZC3H11A SSRP1 GLIS1 NCOA5 PCIF1 ZNF335 ZSWIM1 SPATA25 SNX21 CD40 ENSG00000233352 LOC105372630 RPL5P2
GH20H045967 1.5 ENCODE dbSUPER 14.7 -128.6 -128602 5 ZFP64 FEZF1 DMAP1 YY1 ZNF416 ZNF143 SP3 NFYC ZFP41 MEF2D NCOA5 ZNF335 PCIF1 SLC35C2 TP53RK ZNF663P CD40 ZNF334 ENSG00000271984 PIGT
GH20H045933 1.4 ENCODE dbSUPER 14.6 -163.1 -163146 6 MLX ZFP64 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 SP3 ZC3H11A NFYC SNX21 SPATA25 PLTP TP53RK WFDC3 FTLP1 RNU6ATAC38P RPL13P2 CCNB1IP1P2 RPL5P2
GH20H046107 1.4 FANTOM5 ENCODE dbSUPER 6.7 +9.0 9048 1 CTCF EBF1 BATF RAD21 RELA POLR2A EED SMC3 ZNF143 ATF7 CD40 SPATA25 SLC12A5 SLC12A5-AS1 WFDC3 RPL13P2 SLC35C2 ZNF335 GC20P046113
GH20H046099 0.8 Ensembl ENCODE 10.4 +0.3 300 0 CTCF SMC3 RUNX3 RAD21 EZH2 RPL13P2 GC20P046113
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL13P2 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL13P2 Gene

Chromosome:
20
Start:
46,099,475 bp from pter
End:
46,100,193 bp from pter
Size:
719 bases
Orientation:
Plus strand

Genomic View for RPL13P2 Gene

Genes around RPL13P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL13P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL13P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL13P2 Gene

Proteins for RPL13P2 Gene

Post-translational modifications for RPL13P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL13P2 Gene

Domains & Families for RPL13P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL13P2 Gene

Function for RPL13P2 Gene

Phenotypes From GWAS Catalog for RPL13P2 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPL13P2
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL13P2 Gene

Localization for RPL13P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL13P2 Gene

Pathways & Interactions for RPL13P2 Gene

SuperPathways for RPL13P2 Gene

No Data Available

Interacting Proteins for RPL13P2 Gene

Gene Ontology (GO) - Biological Process for RPL13P2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL13P2 Gene

Drugs & Compounds for RPL13P2 Gene

No Compound Related Data Available

Transcripts for RPL13P2 Gene

mRNA/cDNA for RPL13P2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPL13P2
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for RPL13P2 Gene

No ASD Table

Relevant External Links for RPL13P2 Gene

GeneLoc Exon Structure for
RPL13P2
ECgene alternative splicing isoforms for
RPL13P2

Expression for RPL13P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL13P2 Gene

mRNA differential expression in normal tissues according to GTEx for RPL13P2 Gene

This gene is overexpressed in Testis (x45.9) and Cervix - Endocervix (x7.1).

NURSA nuclear receptor signaling pathways regulating expression of RPL13P2 Gene:

RPL13P2
genes like me logo Genes that share expression patterns with RPL13P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL13P2 Gene

Orthologs for RPL13P2 Gene

Evolution for RPL13P2 Gene

ENSEMBL:
Gene Tree for RPL13P2 (if available)
TreeFam:
Gene Tree for RPL13P2 (if available)

No data available for Orthologs for RPL13P2 Gene

Paralogs for RPL13P2 Gene

No data available for Paralogs for RPL13P2 Gene

Variants for RPL13P2 Gene

Relevant External Links for RPL13P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL13P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL13P2 Gene

Disorders for RPL13P2 Gene

Relevant External Links for RPL13P2

Genetic Association Database (GAD)
RPL13P2
Human Genome Epidemiology (HuGE) Navigator
RPL13P2

No disorders were found for RPL13P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL13P2 Gene

Publications for RPL13P2 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 60
  2. Common genetic variants in candidate genes and risk of familial lymphoid malignancies. (PMID: 19573080) Liang XS … Goldin LR (British journal of haematology 2009) 3 45 60
  3. Association between genetic variants in VEGF, ERCC3 and occupational benzene haematotoxicity. (PMID: 19773279) Hosgood HD … Lan Q (Occupational and environmental medicine 2009) 3 45 60
  4. Two new susceptibility loci for Kawasaki disease identified through genome-wide association analysis. (PMID: 22446961) Lee YC … Wu JY (Nature genetics 2012) 45 60
  5. Genome-wide meta-analysis identifies novel multiple sclerosis susceptibility loci. (PMID: 22190364) Patsopoulos NA … de Bakker PI (Annals of neurology 2011) 45 60

Products for RPL13P2 Gene

Sources for RPL13P2 Gene

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