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Aliases for RPL13P13 Gene

Aliases for RPL13P13 Gene

  • Ribosomal Protein L13 Pseudogene 13 2 3
  • CTD-2086L14.1 5
  • RPL13_5_1672 3

External Ids for RPL13P13 Gene

Previous GeneCards Identifiers for RPL13P13 Gene

  • GC19M061421
  • GC19M056729

Summaries for RPL13P13 Gene

GeneCards Summary for RPL13P13 Gene

RPL13P13 (Ribosomal Protein L13 Pseudogene 13) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL13P13 Gene

Genomics for RPL13P13 Gene

Regulatory Elements for RPL13P13 Gene

Enhancers for RPL13P13 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH19F055652 1.2 ENCODE 16.2 +560.9 560947 8.0 HDGF PKNOX1 MLX CREB3L1 ARNT WRNIP1 ARID4B SIN3A FEZF1 DMAP1 ZNF580 RFPL4AP1 RPL13P13 NAT14 ENSG00000269696 ZNF582-AS1 FIZ1 ZNF667 ENSG00000269275 ZNF470
GH19F055246 1.2 ENCODE 16.2 +964.1 964094 14.5 CREB3L1 MLX DMAP1 YY1 SLC30A9 ZNF143 ZNF263 SP3 NFYC TBX21 HSPBP1 TMEM86B ZNF628 RFPL4AP1 RPL13P13 PPP6R1 BRSK1 MIR6805 RPL28 TMEM238
GH19F055382 1.1 ENCODE 16.2 +831.1 831089 8.2 PKNOX1 WRNIP1 ARID4B SIN3A DMAP1 YY1 ZNF207 PAF1 ZNF263 SP3 RPL28 RFPL4AP1 RPL13P13 MIR6805 ZNF581 U2AF2 COX6B2 BRSK1 FAM71E2 SHISA7
GH19F056216 0.2 ENCODE 0.8 +0.6 550 1.2 ZNF264 RPL13P13 GC19M056169
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL13P13 on UCSC Golden Path with GeneCards custom track

Promoters for RPL13P13 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001818995 452 1001

Genomic Location for RPL13P13 Gene

Chromosome:
19
Start:
56,217,168 bp from pter
End:
56,217,952 bp from pter
Size:
785 bases
Orientation:
Minus strand

Genomic View for RPL13P13 Gene

Genes around RPL13P13 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL13P13 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL13P13 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL13P13 Gene

Proteins for RPL13P13 Gene

Post-translational modifications for RPL13P13 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL13P13 Gene

Domains & Families for RPL13P13 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL13P13 Gene

Function for RPL13P13 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL13P13 Gene

Localization for RPL13P13 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL13P13 Gene

Pathways & Interactions for RPL13P13 Gene

SuperPathways for RPL13P13 Gene

No Data Available

Interacting Proteins for RPL13P13 Gene

Gene Ontology (GO) - Biological Process for RPL13P13 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL13P13 Gene

Transcripts for RPL13P13 Gene

mRNA/cDNA for RPL13P13 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL13P13 Gene

No ASD Table

Relevant External Links for RPL13P13 Gene

GeneLoc Exon Structure for
RPL13P13
ECgene alternative splicing isoforms for
RPL13P13

Expression for RPL13P13 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL13P13 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL13P13 Gene:

RPL13P13
genes like me logo Genes that share expression patterns with RPL13P13: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL13P13 Gene

Orthologs for RPL13P13 Gene

Evolution for RPL13P13 Gene

ENSEMBL:
Gene Tree for RPL13P13 (if available)
TreeFam:
Gene Tree for RPL13P13 (if available)

No data available for Orthologs for RPL13P13 Gene

Paralogs for RPL13P13 Gene

No data available for Paralogs for RPL13P13 Gene

Variants for RPL13P13 Gene

Relevant External Links for RPL13P13 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL13P13

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL13P13 Gene

Disorders for RPL13P13 Gene

No disorders were found for RPL13P13 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL13P13 Gene

Publications for RPL13P13 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL13P13 Gene

Sources for RPL13P13 Gene

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