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Aliases for RPL13P11 Gene

Subcategory (RNA class) for RPL13P11 Gene

lncRNA

Aliases for RPL13P11 Gene

  • Ribosomal Protein L13 Pseudogene 11 2 3
  • RPL13_3_914 3
  • AC022730.1 5

External Ids for RPL13P11 Gene

ORGUL Members for RPL13P11 Gene

Previous GeneCards Identifiers for RPL13P11 Gene

  • GC08M071582
  • GC08M071419

Summaries for RPL13P11 Gene

GeneCards Summary for RPL13P11 Gene

RPL13P11 (Ribosomal Protein L13 Pseudogene 11) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for RPL13P11 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL13P11 Gene

Genomics for RPL13P11 Gene

GeneHancer (GH) Regulatory Elements for RPL13P11 Gene

Promoters and enhancers for RPL13P11 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08I070493 Enhancer 0.6 ENCODE 0.4 +12.8 12812 2 SMARCE1 ATF1 NEUROD1 GATAD2B DPF2 ZNF217 CTBP1 GATA3 TARDBP CREB1 XKR9 LOC101926892 ENSG00000253143 RPL13P11
GH08I070523 Enhancer 0.6 Ensembl ENCODE 0.4 -17.4 -17433 1.3 RUNX3 SPI1 XKR9 LACTB2 LOC101926892 GC08P070527 RPL13P11
GH08I070514 Enhancer 0.3 ENCODE 0.4 -7.6 -7623 0.2 POLR2A RPL13P11 GC08P070527
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL13P11 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL13P11 Gene

Genomic Locations for RPL13P11 Gene
chr8:70,506,251-70,506,818
(GRCh38/hg38)
Size:
568 bases
Orientation:
Minus strand
chr8:71,418,486-71,419,053
(GRCh37/hg19)

Genomic View for RPL13P11 Gene

Genes around RPL13P11 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL13P11 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL13P11 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL13P11 Gene

Proteins for RPL13P11 Gene

Post-translational modifications for RPL13P11 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL13P11 Gene

Domains & Families for RPL13P11 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL13P11 Gene

Function for RPL13P11 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL13P11 Gene

Localization for RPL13P11 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL13P11 Gene

Pathways & Interactions for RPL13P11 Gene

SuperPathways for RPL13P11 Gene

No Data Available

Interacting Proteins for RPL13P11 Gene

Gene Ontology (GO) - Biological Process for RPL13P11 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL13P11 Gene

Drugs & Compounds for RPL13P11 Gene

No Compound Related Data Available

Transcripts for RPL13P11 Gene

mRNA/cDNA for RPL13P11 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL13P11 Gene

No ASD Table

Relevant External Links for RPL13P11 Gene

GeneLoc Exon Structure for
RPL13P11
ECgene alternative splicing isoforms for
RPL13P11

Expression for RPL13P11 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL13P11 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL13P11 Gene:

RPL13P11
genes like me logo Genes that share expression patterns with RPL13P11: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL13P11 Gene

Orthologs for RPL13P11 Gene

Evolution for RPL13P11 Gene

ENSEMBL:
Gene Tree for RPL13P11 (if available)
TreeFam:
Gene Tree for RPL13P11 (if available)

No data available for Orthologs for RPL13P11 Gene

Paralogs for RPL13P11 Gene

No data available for Paralogs for RPL13P11 Gene

Variants for RPL13P11 Gene

Additional Variant Information for RPL13P11 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL13P11

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL13P11 Gene

Disorders for RPL13P11 Gene

Additional Disease Information for RPL13P11

Genetic Association Database
(GAD)

No disorders were found for RPL13P11 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL13P11 Gene

Publications for RPL13P11 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58
  2. Genome-wide association and linkage analyses of hemostatic factors and hematological phenotypes in the Framingham Heart Study. (PMID: 17903294) Yang Q … O'Donnell CJ (BMC medical genetics 2007) 44 58

Products for RPL13P11 Gene

Sources for RPL13P11 Gene

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