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Aliases for RPL13P11 Gene

Subcategory (RNA class) for RPL13P11 Gene

lncRNA

Aliases for RPL13P11 Gene

  • Ribosomal Protein L13 Pseudogene 11 2 3
  • RP11-333A23.2 5
  • RPL13_3_914 3

External Ids for RPL13P11 Gene

ORGUL Members for RPL13P11 Gene

Previous GeneCards Identifiers for RPL13P11 Gene

  • GC08M071582
  • GC08M071419

Summaries for RPL13P11 Gene

GeneCards Summary for RPL13P11 Gene

RPL13P11 (Ribosomal Protein L13 Pseudogene 11) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL13P11 Gene

Genomics for RPL13P11 Gene

Regulatory Elements for RPL13P11 Gene

Enhancers for RPL13P11 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH08F070441 0.5 Ensembl ENCODE 16.3 +64.4 64404 1.5 PKNOX1 KLF17 FEZF1 ZNF2 ZBTB40 ZNF121 ZNF366 SCRT2 KLF7 ZNF391 RPL13P11 H2AFZP2 PRDM14 LOC105375889 XKR9 RPS18P11 LOC101926892
GH08F071354 1.2 Ensembl ENCODE 16.2 -849.4 -849369 2.8 PKNOX1 SIN3A FEZF1 ZNF2 ZNF121 KLF7 ZNF263 SP3 REST TSHZ1 TRAPPC2P2 ENSG00000253287 RPL13P11 GC08M071444 GC08M071253
GH08F070514 0.5 ENCODE 0.4 -7.6 -7623 0.2 PRDM10 RPL13P11 GC08P070527
GH08F070493 0.2 ENCODE 0.4 +12.8 12812 2.0 ZNF217 GATA3 CTBP1 ATF1 CUX1 DPF2 XKR9 LOC101926892 ENSG00000253143 RPL13P11
GH08F070523 0.7 Ensembl ENCODE 0.3 -17.3 -17283 1.8 SMARCA4 SPI1 LACTB2 XKR9 LOC101926892 GC08P070527 RPL13P11
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RPL13P11 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL13P11 Gene

Chromosome:
8
Start:
70,506,251 bp from pter
End:
70,506,818 bp from pter
Size:
568 bases
Orientation:
Minus strand

Genomic View for RPL13P11 Gene

Genes around RPL13P11 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL13P11 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL13P11 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL13P11 Gene

Proteins for RPL13P11 Gene

Post-translational modifications for RPL13P11 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL13P11 Gene

Domains & Families for RPL13P11 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL13P11 Gene

Function for RPL13P11 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL13P11 Gene

Localization for RPL13P11 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL13P11 Gene

Pathways & Interactions for RPL13P11 Gene

SuperPathways for RPL13P11 Gene

No Data Available

Interacting Proteins for RPL13P11 Gene

Gene Ontology (GO) - Biological Process for RPL13P11 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL13P11 Gene

Transcripts for RPL13P11 Gene

mRNA/cDNA for RPL13P11 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL13P11 Gene

No ASD Table

Relevant External Links for RPL13P11 Gene

GeneLoc Exon Structure for
RPL13P11
ECgene alternative splicing isoforms for
RPL13P11

Expression for RPL13P11 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL13P11 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL13P11 Gene:

RPL13P11
genes like me logo Genes that share expression patterns with RPL13P11: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL13P11 Gene

Orthologs for RPL13P11 Gene

Evolution for RPL13P11 Gene

ENSEMBL:
Gene Tree for RPL13P11 (if available)
TreeFam:
Gene Tree for RPL13P11 (if available)

No data available for Orthologs for RPL13P11 Gene

Paralogs for RPL13P11 Gene

No data available for Paralogs for RPL13P11 Gene

Variants for RPL13P11 Gene

Relevant External Links for RPL13P11 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL13P11

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL13P11 Gene

Disorders for RPL13P11 Gene

Relevant External Links for RPL13P11

Genetic Association Database (GAD)
RPL13P11

No disorders were found for RPL13P11 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL13P11 Gene

Publications for RPL13P11 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. Genome-wide association and linkage analyses of hemostatic factors and hematological phenotypes in the Framingham Heart Study. (PMID: 17903294) Yang Q. … O'Donnell C.J. (BMC Med. Genet. 2007) 46 64

Products for RPL13P11 Gene

Sources for RPL13P11 Gene

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