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RPL13P10 Gene(Pseudogene)

Ribosomal Protein L13 Pseudogene 10

GCID:
GC05P181065
GIFtS:
9
Genes Participants
UDN Logo

Aliases for RPL13P10 Gene

Subcategory (RNA class) for RPL13P10 Gene

lncRNA

Aliases for RPL13P10 Gene

  • Ribosomal Protein L13 Pseudogene 10 2 3
  • RPL13_2_647 3
  • AC008620.1 5

External Ids for RPL13P10 Gene

ORGUL Members for RPL13P10 Gene

Previous GeneCards Identifiers for RPL13P10 Gene

  • GC05P180425
  • GC05P180426
  • GC05P180493

Summaries for RPL13P10 Gene

GeneCards Summary for RPL13P10 Gene

RPL13P10 (Ribosomal Protein L13 Pseudogene 10) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for RPL13P10 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL13P10 Gene

Genomics for RPL13P10 Gene

Products:

  1. Regulatory Element

GeneHancer (GH) Regulatory Elements for RPL13P10 Gene

Promoters and enhancers for RPL13P10 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH05I181069 Enhancer 0.7 Ensembl 0.4 +5.1 5094 0.8 NFATC3 RFX5 ETS1 CC2D1A ZNF335 CTBP1 MTA3 POLR2A ZSCAN29 SP2 OR2Y1 BTNL3 RPL13P10 TRV-CAC1-2
GH05I181087 Enhancer 0.6 FANTOM5 0.3 +22.5 22497 0.1 L3MBTL2 MAFG MITF ZNF316 NR2C1 NFE2 ATF7 MAFK ZFX EMSY OR2Y1 TRV-CAC1-2 RPL13P10
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL13P10 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL13P10 Gene

Genomic Locations for RPL13P10 Gene
chr5:181,065,086-181,065,680
(GRCh38/hg38)
Size:
595 bases
Orientation:
Plus strand
chr5:180,492,086-180,492,680
(GRCh37/hg19)

Genomic View for RPL13P10 Gene

Genes around RPL13P10 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL13P10 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL13P10 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for RPL13P10 Gene

Proteins for RPL13P10 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for RPL13P10 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL13P10 Gene

Domains & Families for RPL13P10 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL13P10 Gene

Function for RPL13P10 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL13P10 Gene

Localization for RPL13P10 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL13P10 Gene

Pathways & Interactions for RPL13P10 Gene

SuperPathways for RPL13P10 Gene

PathCards logo More details on SuperPathways for RPL13P10
No Data Available

Interacting Proteins for RPL13P10 Gene

Gene Ontology (GO) - Biological Process for RPL13P10 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL13P10 Gene

Drugs & Compounds for RPL13P10 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for RPL13P10 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for RPL13P10 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL13P10 Gene

No ASD Table

Relevant External Links for RPL13P10 Gene

GeneLoc Exon Structure for
RPL13P10
ECgene alternative splicing isoforms for
RPL13P10

Expression for RPL13P10 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL13P10 Gene

mRNA expression in normal human tissues for RPL13P10 Gene
mRNA expression by GTEx for RPL13P10 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL13P10 Gene:

RPL13P10
genes like me logo Genes that share expression patterns with RPL13P10: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL13P10 Gene

Orthologs for RPL13P10 Gene

Evolution for RPL13P10 Gene

ENSEMBL:
Gene Tree for RPL13P10 (if available)
TreeFam:
Gene Tree for RPL13P10 (if available)

No data available for Orthologs for RPL13P10 Gene

Paralogs for RPL13P10 Gene

No data available for Paralogs for RPL13P10 Gene

Variants for RPL13P10 Gene

Additional Variant Information for RPL13P10 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL13P10

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL13P10 Gene

Disorders for RPL13P10 Gene

No disorders were found for RPL13P10 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL13P10 Gene

Publications for RPL13P10 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPL13P10 Gene

Sources for RPL13P10 Gene

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