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Aliases for RPL13P Gene

Aliases for RPL13P Gene

  • Ribosomal Protein L13 Pseudogene 2 3 5
  • RPL13_3_673 3
  • DJ111M5.1 3
  • BBC1p 3

External Ids for RPL13P Gene

Previous GeneCards Identifiers for RPL13P Gene

  • GC00U914146
  • GC06U900610
  • GC06P028636
  • GC06Pi28830

Summaries for RPL13P Gene

GeneCards Summary for RPL13P Gene

RPL13P (Ribosomal Protein L13 Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL13P Gene

Genomics for RPL13P Gene

Regulatory Elements for RPL13P Gene

Enhancers for RPL13P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06F028862 0.7 ENCODE 0.8 +1.5 1459 0.2 BCOR SMARCA5 ZBTB10 ZNF362 CBX3 ZMYM3 GTF3C2 ZNF589 CBX1 ADNP ZKSCAN3 ZKSCAN4 ZKSCAN8 RPL13P TRA-AGC2-2
GH06F028848 0.8 Ensembl 0.4 -12.5 -12536 0.5 HDAC1 HDGF BRD4 CTCF ATF1 PKNOX1 SUZ12 RAD21 FOSL1 ADNP HCG14 TRIM27 ZNF603P ENSG00000225173 RPL13P
GH06F028854 0.6 FANTOM5 0.4 -6.5 -6517 0.2 HDAC2 ZMYM3 ZBTB33 KDM1A HCG14 TRIM27 HCG15 HCG16 ZNF602P OR2J3 OR2B3 OR14J1 RPL13P ENSG00000225173
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL13P on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL13P Gene

Chromosome:
6
Start:
28,861,400 bp from pter
End:
28,862,047 bp from pter
Size:
648 bases
Orientation:
Plus strand

Genomic View for RPL13P Gene

Genes around RPL13P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL13P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL13P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

Proteins for RPL13P Gene

Post-translational modifications for RPL13P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL13P Gene

Domains & Families for RPL13P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL13P Gene

Function for RPL13P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL13P Gene

Localization for RPL13P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL13P Gene

Pathways & Interactions for RPL13P Gene

SuperPathways for RPL13P Gene

No Data Available

Interacting Proteins for RPL13P Gene

Gene Ontology (GO) - Biological Process for RPL13P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL13P Gene

Transcripts for RPL13P Gene

mRNA/cDNA for RPL13P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL13P Gene

No ASD Table

Relevant External Links for RPL13P Gene

GeneLoc Exon Structure for
RPL13P
ECgene alternative splicing isoforms for
RPL13P

Expression for RPL13P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL13P Gene

mRNA differential expression in normal tissues according to GTEx for RPL13P Gene

This gene is overexpressed in Testis (x19.6), Brain - Amygdala (x6.5), Brain - Substantia nigra (x6.0), Brain - Hypothalamus (x5.5), Brain - Nucleus accumbens (basal ganglia) (x5.3), Brain - Cortex (x5.1), and Cervix - Endocervix (x4.9).

NURSA nuclear receptor signaling pathways regulating expression of RPL13P Gene:

RPL13P
genes like me logo Genes that share expression patterns with RPL13P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL13P Gene

Orthologs for RPL13P Gene

Evolution for RPL13P Gene

ENSEMBL:
Gene Tree for RPL13P (if available)
TreeFam:
Gene Tree for RPL13P (if available)

No data available for Orthologs for RPL13P Gene

Paralogs for RPL13P Gene

No data available for Paralogs for RPL13P Gene

Variants for RPL13P Gene

Relevant External Links for RPL13P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL13P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL13P Gene

Disorders for RPL13P Gene

Relevant External Links for RPL13P

Genetic Association Database (GAD)
RPL13P

No disorders were found for RPL13P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL13P Gene

Publications for RPL13P Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL13P Gene

Sources for RPL13P Gene

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