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Aliases for RPL13AP9 Gene

Subcategory (RNA class) for RPL13AP9 Gene

lncRNA

Aliases for RPL13AP9 Gene

  • Ribosomal Protein L13a Pseudogene 9 2 3
  • RP5-849H19.2 5
  • RPL13A_1_58 3

External Ids for RPL13AP9 Gene

ORGUL Members for RPL13AP9 Gene

Previous GeneCards Identifiers for RPL13AP9 Gene

  • GC01U902285
  • GC01M063107

Summaries for RPL13AP9 Gene

GeneCards Summary for RPL13AP9 Gene

RPL13AP9 (Ribosomal Protein L13a Pseudogene 9) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL13AP9 Gene

Genomics for RPL13AP9 Gene

Regulatory Elements for RPL13AP9 Gene

Enhancers for RPL13AP9 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01G062621 1.3 Ensembl ENCODE 0.4 +19.4 19400 1.5 PKNOX1 FOXA2 MLX ARID4B SIN3A DMAP1 YY1 SLC30A9 ZNF207 FOS ANGPTL3 ENSG00000278967 RPL13AP9
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL13AP9 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL13AP9 Gene

Chromosome:
1
Start:
62,641,117 bp from pter
End:
62,641,693 bp from pter
Size:
577 bases
Orientation:
Minus strand

Genomic View for RPL13AP9 Gene

Genes around RPL13AP9 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL13AP9 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL13AP9 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL13AP9 Gene

Proteins for RPL13AP9 Gene

Post-translational modifications for RPL13AP9 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL13AP9 Gene

Domains & Families for RPL13AP9 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL13AP9 Gene

Function for RPL13AP9 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL13AP9 Gene

Localization for RPL13AP9 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL13AP9 Gene

Pathways & Interactions for RPL13AP9 Gene

SuperPathways for RPL13AP9 Gene

No Data Available

Interacting Proteins for RPL13AP9 Gene

Gene Ontology (GO) - Biological Process for RPL13AP9 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL13AP9 Gene

Drugs & Compounds for RPL13AP9 Gene

No Compound Related Data Available

Transcripts for RPL13AP9 Gene

mRNA/cDNA for RPL13AP9 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL13AP9 Gene

No ASD Table

Relevant External Links for RPL13AP9 Gene

GeneLoc Exon Structure for
RPL13AP9
ECgene alternative splicing isoforms for
RPL13AP9

Expression for RPL13AP9 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL13AP9 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL13AP9 Gene:

RPL13AP9
genes like me logo Genes that share expression patterns with RPL13AP9: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL13AP9 Gene

Orthologs for RPL13AP9 Gene

Evolution for RPL13AP9 Gene

ENSEMBL:
Gene Tree for RPL13AP9 (if available)
TreeFam:
Gene Tree for RPL13AP9 (if available)

No data available for Orthologs for RPL13AP9 Gene

Paralogs for RPL13AP9 Gene

No data available for Paralogs for RPL13AP9 Gene

Variants for RPL13AP9 Gene

Relevant External Links for RPL13AP9 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL13AP9

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL13AP9 Gene

Disorders for RPL13AP9 Gene

Relevant External Links for RPL13AP9

Genetic Association Database (GAD)
RPL13AP9

No disorders were found for RPL13AP9 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL13AP9 Gene

Publications for RPL13AP9 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. Six new loci associated with blood low-density lipoprotein cholesterol, high-density lipoprotein cholesterol or triglycerides in humans. (PMID: 18193044) Kathiresan S. … Orho-Melander M. (Nat. Genet. 2008) 46 64

Products for RPL13AP9 Gene

Sources for RPL13AP9 Gene

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