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Aliases for RPL13AP8 Gene

Aliases for RPL13AP8 Gene

  • Ribosomal Protein L13a Pseudogene 8 2 3
  • RPL13A_2_157 3
  • AC098935.1 5

External Ids for RPL13AP8 Gene

Previous GeneCards Identifiers for RPL13AP8 Gene

  • GC01P205148
  • GC01P207082

Summaries for RPL13AP8 Gene

GeneCards Summary for RPL13AP8 Gene

RPL13AP8 (Ribosomal Protein L13a Pseudogene 8) is a Pseudogene.

Additional gene information for RPL13AP8 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL13AP8 Gene

Genomics for RPL13AP8 Gene

Regulatory Elements for RPL13AP8 Gene

Enhancers for RPL13AP8 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01H206904 1.4 FANTOM5 ENCODE dbSUPER 0.7 -1.5 -1539 3.3 HDAC1 ATF1 RB1 NFRKB ZBTB40 RAD21 EGR1 ELK1 RCOR1 ATF7 ENSG00000271680 IL20 PIGR FCAMR FCMR IL19 RPL13AP8
GH01H206907 1.2 ENCODE dbSUPER 0.7 +1.7 1653 2.5 PKNOX1 SIN3A ZNF2 GLIS2 KLF7 SP3 REST SMARCB1 ZNF610 GLIS1 ENSG00000271680 CDCA4P4 PIGR IL20 FCAMR EIF2D IL19 MAPKAPK2 C1orf116 IKBKE
GH01H206917 1.9 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +15.5 15476 12 HDGF PKNOX1 ARNT SIN3A YBX1 ZNF2 ZBTB7B ZNF766 ZNF143 ZNF207 CDCA4P4 EIF2D MAPKAPK2 ENSG00000271680 CD46 PIGR FCAMR RPL7AP20 IL20 IL19
GH01H206911 1 ENCODE dbSUPER 0.7 +3.7 3696 0.2 CTCF ZNF654 JUN TRIM22 ZNF384 REST BRF2 RAD21 RFX5 MAFF IL20 PIGR FCAMR IL19 MAPKAPK2 RPL13AP8 FCMR
GH01H206912 1.1 ENCODE dbSUPER 0.4 +5.6 5622 2.2 HDGF CTCF MXI1 PKNOX1 RB1 SUZ12 ZIC2 RAD21 RFX5 IRF9 ENSG00000271680 IL20 PIGR FCAMR IL19 MAPKAPK2 IL24 RPL13AP8 FCMR
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL13AP8 on UCSC Golden Path with GeneCards custom track

Promoters for RPL13AP8 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000019072 1905 601 PKNOX1 ZNF2 GLIS2 KLF7 SP3 REST SMARCB1 ZNF610 GLIS1 WT1

Genomic Locations for RPL13AP8 Gene

Genomic Locations for RPL13AP8 Gene
chr1:206,907,595-206,908,735
(GRCh38/hg38)
Size:
1,141 bases
Orientation:
Plus strand
chr1:207,080,943-207,082,080
(GRCh37/hg19)

Genomic View for RPL13AP8 Gene

Genes around RPL13AP8 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL13AP8 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL13AP8 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL13AP8 Gene

Proteins for RPL13AP8 Gene

Post-translational modifications for RPL13AP8 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL13AP8 Gene

Domains & Families for RPL13AP8 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL13AP8 Gene

Function for RPL13AP8 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL13AP8 Gene

Localization for RPL13AP8 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL13AP8 Gene

Pathways & Interactions for RPL13AP8 Gene

SuperPathways for RPL13AP8 Gene

No Data Available

Interacting Proteins for RPL13AP8 Gene

Gene Ontology (GO) - Biological Process for RPL13AP8 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL13AP8 Gene

Drugs & Compounds for RPL13AP8 Gene

No Compound Related Data Available

Transcripts for RPL13AP8 Gene

mRNA/cDNA for RPL13AP8 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL13AP8 Gene

No ASD Table

Relevant External Links for RPL13AP8 Gene

GeneLoc Exon Structure for
RPL13AP8
ECgene alternative splicing isoforms for
RPL13AP8

Expression for RPL13AP8 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL13AP8 Gene

mRNA differential expression in normal tissues according to GTEx for RPL13AP8 Gene

This gene is overexpressed in Whole Blood (x10.6), Small Intestine - Terminal Ileum (x10.5), and Spleen (x10.4).

NURSA nuclear receptor signaling pathways regulating expression of RPL13AP8 Gene:

RPL13AP8
genes like me logo Genes that share expression patterns with RPL13AP8: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL13AP8 Gene

Orthologs for RPL13AP8 Gene

Evolution for RPL13AP8 Gene

ENSEMBL:
Gene Tree for RPL13AP8 (if available)
TreeFam:
Gene Tree for RPL13AP8 (if available)

No data available for Orthologs for RPL13AP8 Gene

Paralogs for RPL13AP8 Gene

No data available for Paralogs for RPL13AP8 Gene

Variants for RPL13AP8 Gene

Relevant External Links for RPL13AP8 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL13AP8

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL13AP8 Gene

Disorders for RPL13AP8 Gene

No disorders were found for RPL13AP8 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL13AP8 Gene

Publications for RPL13AP8 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 60

Products for RPL13AP8 Gene

Sources for RPL13AP8 Gene

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