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Aliases for RPL13AP19 Gene

Aliases for RPL13AP19 Gene

  • Ribosomal Protein L13a Pseudogene 19 2 3 5
  • RPL13A_6_1040 3

External Ids for RPL13AP19 Gene

Previous GeneCards Identifiers for RPL13AP19 Gene

  • GC10M049626
  • GC10M049954

Summaries for RPL13AP19 Gene

GeneCards Summary for RPL13AP19 Gene

RPL13AP19 (Ribosomal Protein L13a Pseudogene 19) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL13AP19 Gene

Genomics for RPL13AP19 Gene

Regulatory Elements for RPL13AP19 Gene

Enhancers for RPL13AP19 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10G048759 1.1 FANTOM5 Ensembl 0.4 -7.3 -7335 0.8 TBP YBX1 EBF1 RELA EED RELB IKZF2 MTA2 NR2F1 BHLHE40 WDFY4 ARHGAP22 C10orf128 RPL13AP19 LOC105378299
GH10G048748 0.6 ENCODE 0.7 +3.3 3278 0.2 EED NR2F1 IKZF1 JUNB GATAD2B RELB EBF1 IKZF2 SPI1 WDFY4 RPL13AP19 GC10M048627
GH10G048742 0.7 dbSUPER 0.4 +7.9 7905 2.5 CTCF PKNOX1 FOXA2 EBF1 FOS RELB IKZF2 MTA2 NRF1 JUNB RPL13AP19 GC10M048627
GH10G048735 0.6 dbSUPER 0.4 +13.8 13811 6.5 HDGF RFX1 BHLHE40 USF2 RAD51 ARID3A SMARCA4 ZBTB33 WDFY4 ARHGAP22 RPL13AP19 GC10M048627
GH10G048803 1.2 FANTOM5 ENCODE 0.2 -53.0 -52968 3.8 HDGF PKNOX1 ATF1 TBL1XR1 ZNF766 ELK1 ZNF207 RELB IKZF2 CBFB WDFY4 LOC105378299 RPL13AP19
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL13AP19 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL13AP19 Gene

Chromosome:
10
Start:
48,745,202 bp from pter
End:
48,752,108 bp from pter
Size:
6,907 bases
Orientation:
Minus strand

Genomic View for RPL13AP19 Gene

Genes around RPL13AP19 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL13AP19 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL13AP19 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL13AP19 Gene

Proteins for RPL13AP19 Gene

Post-translational modifications for RPL13AP19 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL13AP19 Gene

Domains & Families for RPL13AP19 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL13AP19 Gene

Function for RPL13AP19 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL13AP19 Gene

Localization for RPL13AP19 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL13AP19 Gene

Pathways & Interactions for RPL13AP19 Gene

SuperPathways for RPL13AP19 Gene

No Data Available

Interacting Proteins for RPL13AP19 Gene

Gene Ontology (GO) - Biological Process for RPL13AP19 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL13AP19 Gene

Drugs & Compounds for RPL13AP19 Gene

No Compound Related Data Available

Transcripts for RPL13AP19 Gene

mRNA/cDNA for RPL13AP19 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL13AP19 Gene

No ASD Table

Relevant External Links for RPL13AP19 Gene

GeneLoc Exon Structure for
RPL13AP19
ECgene alternative splicing isoforms for
RPL13AP19

Expression for RPL13AP19 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL13AP19 Gene

mRNA differential expression in normal tissues according to GTEx for RPL13AP19 Gene

This gene is overexpressed in Whole Blood (x6.8).

NURSA nuclear receptor signaling pathways regulating expression of RPL13AP19 Gene:

RPL13AP19
genes like me logo Genes that share expression patterns with RPL13AP19: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL13AP19 Gene

Orthologs for RPL13AP19 Gene

Evolution for RPL13AP19 Gene

ENSEMBL:
Gene Tree for RPL13AP19 (if available)
TreeFam:
Gene Tree for RPL13AP19 (if available)

No data available for Orthologs for RPL13AP19 Gene

Paralogs for RPL13AP19 Gene

No data available for Paralogs for RPL13AP19 Gene

Variants for RPL13AP19 Gene

Relevant External Links for RPL13AP19 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL13AP19

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL13AP19 Gene

Disorders for RPL13AP19 Gene

No disorders were found for RPL13AP19 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL13AP19 Gene

Publications for RPL13AP19 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL13AP19 Gene

Sources for RPL13AP19 Gene

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