Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RPL13AP18 Gene

Aliases for RPL13AP18 Gene

  • Ribosomal Protein L13a Pseudogene 18 2 3
  • RP11-941H19.1 5
  • RPL13A_5_919 3

External Ids for RPL13AP18 Gene

Previous GeneCards Identifiers for RPL13AP18 Gene

  • GC08M081341
  • GC08M081178

Summaries for RPL13AP18 Gene

GeneCards Summary for RPL13AP18 Gene

RPL13AP18 (Ribosomal Protein L13a Pseudogene 18) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL13AP18 Gene

Genomics for RPL13AP18 Gene

Regulatory Elements for RPL13AP18 Gene

Enhancers for RPL13AP18 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH08F080330 0.9 ENCODE 16.3 -61.9 -61937 0.1 PKNOX1 ZNF133 INSM2 KLF17 FEZF1 ZNF48 ZNF391 OVOL3 REST ZNF645 LOC100216346 RPL13AP18 ENSG00000253238 RPL3P9 RNU6-1213P ENSG00000251867 ZBTB10 ENSG00000206649 GC08M080317
GH08F080278 0.5 ENCODE 0.4 -11.0 -10996 1.9 ZNF664 JUND CBX2 PRDM10 TPD52 ENSG00000206649 RNU6-1213P GC08M080196 RPL13AP18
GH08F080285 0.2 ENCODE 0.3 -16.5 -16472 0.1 ENSG00000206649 GC08M080196 RPL13AP18
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL13AP18 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL13AP18 Gene

Chromosome:
8
Start:
80,265,505 bp from pter
End:
80,268,774 bp from pter
Size:
3,270 bases
Orientation:
Minus strand

Genomic View for RPL13AP18 Gene

Genes around RPL13AP18 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL13AP18 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL13AP18 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL13AP18 Gene

Proteins for RPL13AP18 Gene

Post-translational modifications for RPL13AP18 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL13AP18 Gene

Domains & Families for RPL13AP18 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL13AP18 Gene

Function for RPL13AP18 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL13AP18 Gene

Localization for RPL13AP18 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL13AP18 Gene

Pathways & Interactions for RPL13AP18 Gene

SuperPathways for RPL13AP18 Gene

No Data Available

Interacting Proteins for RPL13AP18 Gene

Gene Ontology (GO) - Biological Process for RPL13AP18 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL13AP18 Gene

Transcripts for RPL13AP18 Gene

mRNA/cDNA for RPL13AP18 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL13AP18 Gene

No ASD Table

Relevant External Links for RPL13AP18 Gene

GeneLoc Exon Structure for
RPL13AP18
ECgene alternative splicing isoforms for
RPL13AP18

Expression for RPL13AP18 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL13AP18 Gene

mRNA differential expression in normal tissues according to GTEx for RPL13AP18 Gene

This gene is overexpressed in Testis (x53.0).

NURSA nuclear receptor signaling pathways regulating expression of RPL13AP18 Gene:

RPL13AP18
genes like me logo Genes that share expression patterns with RPL13AP18: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL13AP18 Gene

Orthologs for RPL13AP18 Gene

Evolution for RPL13AP18 Gene

ENSEMBL:
Gene Tree for RPL13AP18 (if available)
TreeFam:
Gene Tree for RPL13AP18 (if available)

No data available for Orthologs for RPL13AP18 Gene

Paralogs for RPL13AP18 Gene

No data available for Paralogs for RPL13AP18 Gene

Variants for RPL13AP18 Gene

Relevant External Links for RPL13AP18 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL13AP18

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL13AP18 Gene

Disorders for RPL13AP18 Gene

No disorders were found for RPL13AP18 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL13AP18 Gene

Publications for RPL13AP18 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL13AP18 Gene

Sources for RPL13AP18 Gene

Content
Loading form....