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Aliases for RPL13AP17 Gene

Aliases for RPL13AP17 Gene

  • Ribosomal Protein L13a Pseudogene 17 2 3 5
  • RPL13A_6_816 3

External Ids for RPL13AP17 Gene

Previous GeneCards Identifiers for RPL13AP17 Gene

  • GC07P077815
  • GC07P077976
  • GC07P072578

Summaries for RPL13AP17 Gene

GeneCards Summary for RPL13AP17 Gene

RPL13AP17 (Ribosomal Protein L13a Pseudogene 17) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL13AP17 Gene

Genomics for RPL13AP17 Gene

Regulatory Elements for RPL13AP17 Gene

Enhancers for RPL13AP17 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07F078327 1.1 Ensembl ENCODE 0.3 -20.0 -19972 0.9 JUND SIN3A RPL13AP17 GC07P078209
GH07F078326 0.2 ENCODE 0.3 -20.7 -20744 0.2 JUND RPL13AP17 GC07P078209
GH07F078323 0.3 FANTOM5 0.3 -23.1 -23132 0.2 RPL13AP17 GC07P078209
GH07F078399 0.4 ENCODE 0.2 +52.7 52668 0.7 GC07M078409 RPL13AP17
GH07F078400 0.4 ENCODE 0.2 +53.9 53869 0.7 NFE2 GC07M078409 RPL13AP17
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RPL13AP17 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL13AP17 Gene

78,347,142 bp from pter
78,359,458 bp from pter
12,317 bases
Plus strand

Genomic View for RPL13AP17 Gene

Genes around RPL13AP17 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL13AP17 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL13AP17 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL13AP17 Gene

Proteins for RPL13AP17 Gene

Post-translational modifications for RPL13AP17 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL13AP17 Gene

Domains & Families for RPL13AP17 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL13AP17 Gene

Function for RPL13AP17 Gene

Phenotypes for RPL13AP17 Gene

GenomeRNAi human phenotypes for RPL13AP17:
genes like me logo Genes that share phenotypes with RPL13AP17: view

Animal Model Products

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL13AP17 Gene

Localization for RPL13AP17 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL13AP17 Gene

Pathways & Interactions for RPL13AP17 Gene

SuperPathways for RPL13AP17 Gene

No Data Available

Interacting Proteins for RPL13AP17 Gene

Gene Ontology (GO) - Biological Process for RPL13AP17 Gene


No data available for Pathways by source and SIGNOR curated interactions for RPL13AP17 Gene

Transcripts for RPL13AP17 Gene

mRNA/cDNA for RPL13AP17 Gene

(2) Additional mRNA sequences :
(3) Selected AceView cDNA sequences:
(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for RPL13AP17 Gene

Ribosomal protein L13a pseudogene 17:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for RPL13AP17 Gene

No ASD Table

Relevant External Links for RPL13AP17 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for RPL13AP17 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL13AP17 Gene

mRNA differential expression in normal tissues according to GTEx for RPL13AP17 Gene

This gene is overexpressed in Lung (x34.5) and Artery - Tibial (x5.7).

NURSA nuclear receptor signaling pathways regulating expression of RPL13AP17 Gene:


SOURCE GeneReport for Unigene cluster for RPL13AP17 Gene:

genes like me logo Genes that share expression patterns with RPL13AP17: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL13AP17 Gene

Orthologs for RPL13AP17 Gene

Evolution for RPL13AP17 Gene

Gene Tree for RPL13AP17 (if available)
Gene Tree for RPL13AP17 (if available)

No data available for Orthologs for RPL13AP17 Gene

Paralogs for RPL13AP17 Gene

No data available for Paralogs for RPL13AP17 Gene

Variants for RPL13AP17 Gene

Sequence variations from dbSNP and Humsavar for RPL13AP17 Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type
rs10244261 -- 78,356,675(+) TGGAA(C/G)CTTGA intron-variant
rs10246357 -- 78,352,399(+) AATGG(A/C)ATCTA intron-variant
rs10248696 -- 78,357,876(+) AGTTT(C/T)TATGA intron-variant
rs10264192 -- 78,352,128(+) aatgc(C/T)aacta intron-variant
rs10267249 -- 78,358,198(+) AAAAa(A/T)atata intron-variant

Structural Variations from Database of Genomic Variants (DGV) for RPL13AP17 Gene

Variant ID Type Subtype PubMed ID
esv3613815 CNV gain 21293372
nsv1022764 CNV loss 25217958
nsv607654 CNV gain 21841781

Relevant External Links for RPL13AP17 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for RPL13AP17 Gene

Disorders for RPL13AP17 Gene

Relevant External Links for RPL13AP17

Genetic Association Database (GAD)
Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for RPL13AP17 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL13AP17 Gene

Publications for RPL13AP17 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. A proteome-scale map of the human interactome network. (PMID: 25416956) Rolland T. … Vidal M. (Cell 2014) 3 64
  3. Genome-wide association study of anthropometric traits and evidence of interactions with age and study year in Filipino women. (PMID: 20966902) Croteau-Chonka D.C. … Mohlke K.L. (Obesity (Silver Spring) 2011) 3 64
  4. Genome-wide association to body mass index and waist circumference: the Framingham Heart Study 100K project. (PMID: 17903300) Fox C.S. … Atwood L.D. (BMC Med. Genet. 2007) 46 64
  5. Noncanonical function of glutamyl-prolyl-tRNA synthetase: gene- specific silencing of translation. (PMID: 15479637) Sampath P. … Fox P.L. (Cell 2004) 3 64

Products for RPL13AP17 Gene

Sources for RPL13AP17 Gene

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