Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RPL13AP16 Gene

Aliases for RPL13AP16 Gene

  • Ribosomal Protein L13a Pseudogene 16 2 3
  • RPL13A_7_832 3
  • CTA-351J1.1 5

External Ids for RPL13AP16 Gene

Previous GeneCards Identifiers for RPL13AP16 Gene

  • GC07P105248
  • GC07P105460

Summaries for RPL13AP16 Gene

GeneCards Summary for RPL13AP16 Gene

RPL13AP16 (Ribosomal Protein L13a Pseudogene 16) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL13AP16 Gene

Genomics for RPL13AP16 Gene

Regulatory Elements for RPL13AP16 Gene

Enhancers for RPL13AP16 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07F105816 0.8 Ensembl ENCODE 0.8 -3.0 -2975 1.0 OSR2 ZNF263 GATA3 ZIC2 RPL13AP16 PIR36718
GH07F105805 1.6 FANTOM5 Ensembl ENCODE 0.4 -11.7 -11692 5.4 TBP PKNOX1 TBL1XR1 WRNIP1 SIN3A BMI1 ZBTB40 RFX5 ZNF121 GATA2 ATXN7L1 RPL13AP16 PIR36718
GH07F105828 1.2 Ensembl ENCODE 0.4 +11.1 11106 3.2 PKNOX1 ATF1 KLF17 SIN3A DNMT3B RAD21 ZEB1 RARA RFX5 YY1 CDHR3 RINT1 ATXN7L1 RPL13AP16
GH07F105819 0.4 FANTOM5 0.8 +0.1 117 0.3 RPL13AP16 CDHR3
GH07F105848 1 Ensembl ENCODE 0.3 +30.4 30357 3.4 BCOR SOX13 ZMYM3 EBF1 THRB ETS1 RARA FOSL1 NR2F6 FOS ATXN7L1 CDHR3 RPL13AP16
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL13AP16 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL13AP16 Gene

105,819,492 bp from pter
105,820,127 bp from pter
636 bases
Plus strand

Genomic View for RPL13AP16 Gene

Genes around RPL13AP16 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL13AP16 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL13AP16 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL13AP16 Gene

Proteins for RPL13AP16 Gene

Post-translational modifications for RPL13AP16 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL13AP16 Gene

Domains & Families for RPL13AP16 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL13AP16 Gene

Function for RPL13AP16 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL13AP16 Gene

Localization for RPL13AP16 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL13AP16 Gene

Pathways & Interactions for RPL13AP16 Gene

SuperPathways for RPL13AP16 Gene

No Data Available

Interacting Proteins for RPL13AP16 Gene

Gene Ontology (GO) - Biological Process for RPL13AP16 Gene


No data available for Pathways by source and SIGNOR curated interactions for RPL13AP16 Gene

Transcripts for RPL13AP16 Gene

mRNA/cDNA for RPL13AP16 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL13AP16 Gene

No ASD Table

Relevant External Links for RPL13AP16 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for RPL13AP16 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL13AP16 Gene

mRNA differential expression in normal tissues according to GTEx for RPL13AP16 Gene

This gene is overexpressed in Testis (x18.7) and Whole Blood (x4.5).

NURSA nuclear receptor signaling pathways regulating expression of RPL13AP16 Gene:

genes like me logo Genes that share expression patterns with RPL13AP16: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL13AP16 Gene

Orthologs for RPL13AP16 Gene

Evolution for RPL13AP16 Gene

Gene Tree for RPL13AP16 (if available)
Gene Tree for RPL13AP16 (if available)

No data available for Orthologs for RPL13AP16 Gene

Paralogs for RPL13AP16 Gene

No data available for Paralogs for RPL13AP16 Gene

Variants for RPL13AP16 Gene

Relevant External Links for RPL13AP16 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL13AP16 Gene

Disorders for RPL13AP16 Gene

No disorders were found for RPL13AP16 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL13AP16 Gene

Publications for RPL13AP16 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL13AP16 Gene

Sources for RPL13AP16 Gene

Loading form....