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Aliases for RPL13AP15 Gene

Subcategory (RNA class) for RPL13AP15 Gene


Aliases for RPL13AP15 Gene

  • Ribosomal Protein L13a Pseudogene 15 2 3
  • RPL13A_4_746 3
  • RP3-354N19.3 5

External Ids for RPL13AP15 Gene

ORGUL Members for RPL13AP15 Gene

Previous GeneCards Identifiers for RPL13AP15 Gene

  • GC06U901630
  • GC06M119590

Summaries for RPL13AP15 Gene

GeneCards Summary for RPL13AP15 Gene

RPL13AP15 (Ribosomal Protein L13a Pseudogene 15) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL13AP15 Gene

Genomics for RPL13AP15 Gene

Regulatory Elements for RPL13AP15 Gene

Enhancers for RPL13AP15 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06F119334 0.5 Ensembl 5.6 -65.9 -65887 2.0 ZNF316 POLR2A FOXK2 NFE2 ZNF600 MAFK NFE2L2 MAFG TBX21 SMARCB1 FAM184A RPL13AP15 GC06P119328 PIR63066
GH06F119260 0.8 Ensembl ENCODE 5.3 +8.2 8196 1.8 PKNOX1 ATF1 MLX ZFP64 ARID4B YY1 SLC30A9 FOS SP5 NFYC RNU6-194P RPL13AP15 GC06P119180
GH06F119307 1.2 FANTOM5 Ensembl ENCODE 5.2 -42.4 -42371 9.1 HDGF PKNOX1 ARNT WRNIP1 ARID4B FEZF1 ZNF2 YY1 FOS SP3 MAN1A1 RPL13AP15 MCM9 RNU6-194P GC06M119272
GH06F119324 1 ENCODE 5 -54.9 -54945 1.4 HDAC1 ATF1 CBX3 TBL1XR1 CHAMP1 GATA2 CREM EGR2 ZBTB11 CEBPB RPL13AP15 RNU6-194P GC06M119272
GH06F119337 0.2 Ensembl 5 -67.8 -67787 0.2 RPL13AP15 PIR63066 GC06P119328
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RPL13AP15 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL13AP15 Gene

119,269,133 bp from pter
119,269,714 bp from pter
582 bases
Minus strand

Genomic View for RPL13AP15 Gene

Genes around RPL13AP15 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL13AP15 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL13AP15 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL13AP15 Gene

Proteins for RPL13AP15 Gene

Post-translational modifications for RPL13AP15 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL13AP15 Gene

Domains & Families for RPL13AP15 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL13AP15 Gene

Function for RPL13AP15 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL13AP15 Gene

Localization for RPL13AP15 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL13AP15 Gene

Pathways & Interactions for RPL13AP15 Gene

SuperPathways for RPL13AP15 Gene

No Data Available

Interacting Proteins for RPL13AP15 Gene

Gene Ontology (GO) - Biological Process for RPL13AP15 Gene


No data available for Pathways by source and SIGNOR curated interactions for RPL13AP15 Gene

Transcripts for RPL13AP15 Gene

mRNA/cDNA for RPL13AP15 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL13AP15 Gene

No ASD Table

Relevant External Links for RPL13AP15 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for RPL13AP15 Gene

mRNA expression in normal human tissues for RPL13AP15 Gene

mRNA differential expression in normal tissues according to GTEx for RPL13AP15 Gene

This gene is overexpressed in Whole Blood (x5.1).

NURSA nuclear receptor signaling pathways regulating expression of RPL13AP15 Gene:

genes like me logo Genes that share expression patterns with RPL13AP15: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL13AP15 Gene

Orthologs for RPL13AP15 Gene

Evolution for RPL13AP15 Gene

Gene Tree for RPL13AP15 (if available)
Gene Tree for RPL13AP15 (if available)

No data available for Orthologs for RPL13AP15 Gene

Paralogs for RPL13AP15 Gene

No data available for Paralogs for RPL13AP15 Gene

Variants for RPL13AP15 Gene

Relevant External Links for RPL13AP15 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL13AP15 Gene

Disorders for RPL13AP15 Gene

Relevant External Links for RPL13AP15

Genetic Association Database (GAD)

No disorders were found for RPL13AP15 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL13AP15 Gene

Publications for RPL13AP15 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. Genome-wide association study reveals multiple loci associated with primary tooth development during infancy. (PMID: 20195514) Pillas D. … Jarvelin M.R. (PLoS Genet. 2010) 46 64
  3. Host determinants of HIV-1 control in African Americans. (PMID: 20205591) Pelak K. … . (J. Infect. Dis. 2010) 46 64
  4. A genome-wide association study for blood lipid phenotypes in the Framingham Heart Study. (PMID: 17903299) Kathiresan S. … Cupples L.A. (BMC Med. Genet. 2007) 46 64
  5. Genome-wide association of echocardiographic dimensions, brachial artery endothelial function and treadmill exercise responses in the Framingham Heart Study. (PMID: 17903301) Vasan R.S. … Benjamin E.J. (BMC Med. Genet. 2007) 46 64

Products for RPL13AP15 Gene

Sources for RPL13AP15 Gene

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