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Aliases for RPL12P9 Gene

Aliases for RPL12P9 Gene

  • Ribosomal Protein L12 Pseudogene 9 2 3 5
  • RPL12_18_1725 3

External Ids for RPL12P9 Gene

Previous GeneCards Identifiers for RPL12P9 Gene

  • GC21U900194
  • GC21M030499

Summaries for RPL12P9 Gene

GeneCards Summary for RPL12P9 Gene

RPL12P9 (Ribosomal Protein L12 Pseudogene 9) is a Pseudogene.

Additional gene information for RPL12P9 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL12P9 Gene

Genomics for RPL12P9 Gene

Regulatory Elements for RPL12P9 Gene

Enhancers for RPL12P9 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH21H029216 2 FANTOM5 Ensembl ENCODE dbSUPER 39 -91.7 -91677 7 PKNOX1 FOXA2 FEZF1 ZNF2 ZNF302 FOS DEK SP3 REST ZNF662 LTN1 USP16 ENSG00000231125 RPL23P2 RPL12P9 BACH1 N6AMT1 HSPD1P7 ENSG00000259981 LINC00307
GH21H029298 1.4 ENCODE dbSUPER 34 -172.6 -172572 5 HDGF ARNT ZFP64 ARID4B SIN3A DMAP1 YY1 ZNF766 FOS SP3 ENSG00000231125 LTN1 RPL23P2 USP16 RPL12P9 LOC105369299 GC21P029306 GC21P029305
GH21H029304 1.1 ENCODE dbSUPER 26.2 -177.6 -177643 2 PKNOX1 NFRKB ZSCAN4 CHAMP1 SCRT2 RUNX3 ZNF202 CAVIN1 ZBTB11 ZEB2 LTN1 ENSG00000231125 RPL12P9 CCT8 USP16 ENSG00000224649 GC21P029306 GC21P029305 GC21P029330 GC21P029329
GH21H029075 1.3 FANTOM5 ENCODE 19.9 +49.7 49693 6 PKNOX1 ZNF133 SIN3A YY1 ZNF207 ZNF548 SP3 NFYC TSHZ1 REST ENSG00000231125 LTN1 CCT8 RWDD2B RPL12P9 USP16 RPL23P2 GRIK1-AS1 BACH1 GC21P029079
GH21H028991 1.2 ENCODE 21.1 +135.5 135458 2 HDGF PKNOX1 FOXA2 ARNT ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 USP16 CCT8 LTN1 RWDD2B RPL23P2 N6AMT1 RPL12P9 ENSG00000231125 ENSG00000273254 MAP3K7CL
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL12P9 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL12P9 Gene

Chromosome:
21
Start:
29,127,649 bp from pter
End:
29,128,275 bp from pter
Size:
627 bases
Orientation:
Minus strand

Genomic View for RPL12P9 Gene

Genes around RPL12P9 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL12P9 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL12P9 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL12P9 Gene

Proteins for RPL12P9 Gene

Post-translational modifications for RPL12P9 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL12P9 Gene

Domains & Families for RPL12P9 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL12P9 Gene

Function for RPL12P9 Gene

Phenotypes From GWAS Catalog for RPL12P9 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPL12P9
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL12P9 Gene

Localization for RPL12P9 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL12P9 Gene

Pathways & Interactions for RPL12P9 Gene

SuperPathways for RPL12P9 Gene

No Data Available

Interacting Proteins for RPL12P9 Gene

Gene Ontology (GO) - Biological Process for RPL12P9 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL12P9 Gene

Drugs & Compounds for RPL12P9 Gene

No Compound Related Data Available

Transcripts for RPL12P9 Gene

mRNA/cDNA for RPL12P9 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for RPL12P9
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for RPL12P9 Gene

No ASD Table

Relevant External Links for RPL12P9 Gene

GeneLoc Exon Structure for
RPL12P9
ECgene alternative splicing isoforms for
RPL12P9

Expression for RPL12P9 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL12P9 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL12P9 Gene:

RPL12P9
genes like me logo Genes that share expression patterns with RPL12P9: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL12P9 Gene

Orthologs for RPL12P9 Gene

Evolution for RPL12P9 Gene

ENSEMBL:
Gene Tree for RPL12P9 (if available)
TreeFam:
Gene Tree for RPL12P9 (if available)

No data available for Orthologs for RPL12P9 Gene

Paralogs for RPL12P9 Gene

No data available for Paralogs for RPL12P9 Gene

Variants for RPL12P9 Gene

Relevant External Links for RPL12P9 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL12P9

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL12P9 Gene

Disorders for RPL12P9 Gene

No disorders were found for RPL12P9 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL12P9 Gene

Publications for RPL12P9 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 60

Products for RPL12P9 Gene

Sources for RPL12P9 Gene

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