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Aliases for RPL12P5 Gene

Subcategory (RNA class) for RPL12P5 Gene

lncRNA

Aliases for RPL12P5 Gene

  • Ribosomal Protein L12 Pseudogene 5 2 3 5
  • RPL12_15_1346 3

External Ids for RPL12P5 Gene

ORGUL Members for RPL12P5 Gene

Previous GeneCards Identifiers for RPL12P5 Gene

  • GC14U900109
  • GC14P029250
  • GC14P030330
  • GC14P031261

Summaries for RPL12P5 Gene

GeneCards Summary for RPL12P5 Gene

RPL12P5 (Ribosomal Protein L12 Pseudogene 5) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL12P5 Gene

Genomics for RPL12P5 Gene

Regulatory Elements for RPL12P5 Gene

Enhancers for RPL12P5 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH14F030802 0.9 ENCODE 0.4 +12.1 12110 1.6 ELF3 MLX ARID4B DMAP1 RAD21 ZSCAN9 RARA SLC30A9 CREM THAP11 RPL12P5 ENSG00000240513
GH14F030690 0.9 Ensembl 0.1 -100.1 -100086 1.6 PKNOX1 MLX NFRKB ZFP64 ARID4B DMAP1 ZBTB40 ZNF2 ZNF366 FOS LOC101927124 SCFD1 UBE2CP1 RPL12P5
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL12P5 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL12P5 Gene

Chromosome:
14
Start:
30,791,098 bp from pter
End:
30,791,489 bp from pter
Size:
392 bases
Orientation:
Plus strand

Genomic View for RPL12P5 Gene

Genes around RPL12P5 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL12P5 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL12P5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL12P5 Gene

Proteins for RPL12P5 Gene

Post-translational modifications for RPL12P5 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL12P5 Gene

Domains & Families for RPL12P5 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL12P5 Gene

Function for RPL12P5 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL12P5 Gene

Localization for RPL12P5 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL12P5 Gene

Pathways & Interactions for RPL12P5 Gene

SuperPathways for RPL12P5 Gene

No Data Available

Interacting Proteins for RPL12P5 Gene

Gene Ontology (GO) - Biological Process for RPL12P5 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL12P5 Gene

Transcripts for RPL12P5 Gene

mRNA/cDNA for RPL12P5 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL12P5 Gene

No ASD Table

Relevant External Links for RPL12P5 Gene

GeneLoc Exon Structure for
RPL12P5
ECgene alternative splicing isoforms for
RPL12P5

Expression for RPL12P5 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL12P5 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL12P5 Gene:

RPL12P5
genes like me logo Genes that share expression patterns with RPL12P5: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL12P5 Gene

Orthologs for RPL12P5 Gene

Evolution for RPL12P5 Gene

ENSEMBL:
Gene Tree for RPL12P5 (if available)
TreeFam:
Gene Tree for RPL12P5 (if available)

No data available for Orthologs for RPL12P5 Gene

Paralogs for RPL12P5 Gene

No data available for Paralogs for RPL12P5 Gene

Variants for RPL12P5 Gene

Relevant External Links for RPL12P5 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL12P5

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL12P5 Gene

Disorders for RPL12P5 Gene

Relevant External Links for RPL12P5

Genetic Association Database (GAD)
RPL12P5

No disorders were found for RPL12P5 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL12P5 Gene

Publications for RPL12P5 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. A genome-wide association for kidney function and endocrine-related traits in the NHLBI's Framingham Heart Study. (PMID: 17903292) Hwang S.J. … Fox C.S. (BMC Med. Genet. 2007) 46 64

Products for RPL12P5 Gene

Sources for RPL12P5 Gene

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