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Aliases for RPL12P42 Gene

Aliases for RPL12P42 Gene

  • Ribosomal Protein L12 Pseudogene 42 2 3 5
  • RPL12_15_1630 3

External Ids for RPL12P42 Gene

Previous GeneCards Identifiers for RPL12P42 Gene

  • GC19M013134
  • GC19M013269

Summaries for RPL12P42 Gene

GeneCards Summary for RPL12P42 Gene

RPL12P42 (Ribosomal Protein L12 Pseudogene 42) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL12P42 Gene

Genomics for RPL12P42 Gene

Regulatory Elements for RPL12P42 Gene

Enhancers for RPL12P42 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH19F013000 1.2 FANTOM5 Ensembl ENCODE 4.4 +156.9 156934 3.4 BCOR ZNF362 ZMYM3 HIC1 ZNF366 POLR2A KDM1A FOS EGR2 MAST1 GCDH MAN2B1 RPL12P42 STX10 TNPO2 ZNF490 NFIX GC19M012993 ENSG00000267417
GH19F012994 1 ENCODE 5.2 +161.9 161926 4.3 HDGF SIN3A ARID4B GLI4 ZNF2 SP3 YY2 REST SMARCA4 MXD3 RNASEH2A GCDH WDR83OS CALR RPL12P42 GC19M012993 ENSG00000267417
GH19F013160 1.6 FANTOM5 ENCODE 0.4 -8.4 -8422 13.8 MLX ZFP64 FEZF1 DMAP1 YY1 ZNF143 ZNF263 SP3 NFYC TBX21 CCDC130 WDR83OS ZNF564 ZNF44 ZNF791 ZNF799 TRMT1 C19orf43 ZNF709 DCAF15
GH19F013190 1.1 Ensembl ENCODE 0.3 -32.4 -32396 2.0 ELF3 ZFP64 NFXL1 RAD21 RARA YY1 SLC30A9 CREM SMARCA5 NR2F2 NANOS3 ZNF709 WDR83 GC19P013200 RPL12P42
GH19F013193 1.1 Ensembl ENCODE 0.3 -36.0 -36045 3.0 ARID4B THRB ZNF48 ZNF2 RAD21 RARA YY1 ZNF143 ETV6 MIXL1 GC19P013200 RPL12P42
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL12P42 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL12P42 Gene

Chromosome:
19
Start:
13,157,910 bp from pter
End:
13,158,874 bp from pter
Size:
965 bases
Orientation:
Minus strand

Genomic View for RPL12P42 Gene

Genes around RPL12P42 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL12P42 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL12P42 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL12P42 Gene

Proteins for RPL12P42 Gene

Post-translational modifications for RPL12P42 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL12P42 Gene

Domains & Families for RPL12P42 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL12P42 Gene

Function for RPL12P42 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL12P42 Gene

Localization for RPL12P42 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL12P42 Gene

Pathways & Interactions for RPL12P42 Gene

SuperPathways for RPL12P42 Gene

No Data Available

Interacting Proteins for RPL12P42 Gene

Gene Ontology (GO) - Biological Process for RPL12P42 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL12P42 Gene

Transcripts for RPL12P42 Gene

mRNA/cDNA for RPL12P42 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL12P42 Gene

No ASD Table

Relevant External Links for RPL12P42 Gene

GeneLoc Exon Structure for
RPL12P42
ECgene alternative splicing isoforms for
RPL12P42

Expression for RPL12P42 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL12P42 Gene

mRNA differential expression in normal tissues according to GTEx for RPL12P42 Gene

This gene is overexpressed in Testis (x4.5) and Whole Blood (x4.0).

NURSA nuclear receptor signaling pathways regulating expression of RPL12P42 Gene:

RPL12P42
genes like me logo Genes that share expression patterns with RPL12P42: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL12P42 Gene

Orthologs for RPL12P42 Gene

Evolution for RPL12P42 Gene

ENSEMBL:
Gene Tree for RPL12P42 (if available)
TreeFam:
Gene Tree for RPL12P42 (if available)

No data available for Orthologs for RPL12P42 Gene

Paralogs for RPL12P42 Gene

No data available for Paralogs for RPL12P42 Gene

Variants for RPL12P42 Gene

Relevant External Links for RPL12P42 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL12P42

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL12P42 Gene

Disorders for RPL12P42 Gene

No disorders were found for RPL12P42 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL12P42 Gene

Publications for RPL12P42 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL12P42 Gene

Sources for RPL12P42 Gene

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