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Aliases for RPL12P4 Gene

Aliases for RPL12P4 Gene

  • Ribosomal Protein L12 Pseudogene 4 2 3 5
  • RPL12_23_1714 3
  • DJ800C24.1 3

External Ids for RPL12P4 Gene

Previous GeneCards Identifiers for RPL12P4 Gene

  • GC20U990079
  • GC20P054329
  • GC20P054376
  • GC20P053124
  • GC20P053691
  • GC20P050437

Summaries for RPL12P4 Gene

GeneCards Summary for RPL12P4 Gene

RPL12P4 (Ribosomal Protein L12 Pseudogene 4) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL12P4 Gene

Genomics for RPL12P4 Gene

Regulatory Elements for RPL12P4 Gene

Enhancers for RPL12P4 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH20G055103 0.9 ENCODE 0.3 +28.9 28901 0.2 ATF1 ARNT TCF12 ZNF766 ELK1 GATA2 CAVIN1 NCOA1 ZNF592 MBD2 RPL12P4 LINC01440
GH20G055159 0.8 ENCODE 0.2 +86.5 86533 2.3 SOX13 MAX ARID4B NFXL1 CEBPG ZNF644 RAD21 YY1 TEAD3 HNF4G RPL12P4 LINC01440
GH20G055151 0.8 FANTOM5 0.2 +76.8 76805 0.3 IRF2 TAF1 CEBPG ZSCAN9 YY1 FOXK2 ADNP EED ETV6 BCLAF1 RPL12P4 LINC01440
GH20G055173 0.8 ENCODE 0.1 +99.0 98968 0.7 BACH1 MAX NFXL1 FOSL1 ZNF316 ADNP ETV6 FOS NFE2 BCLAF1 RPL12P4 LINC01440
GH20G055166 0.5 ENCODE 0.1 +91.7 91731 0.2 NFIC NFIB NFXL1 RPL12P4 LINC01440
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL12P4 on UCSC Golden Path with GeneCards custom track

Promoters for RPL12P4 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000139070 145 199 ZBTB33 CUX1

Genomic Location for RPL12P4 Gene

Chromosome:
20
Start:
55,074,556 bp from pter
End:
55,075,178 bp from pter
Size:
623 bases
Orientation:
Plus strand

Genomic View for RPL12P4 Gene

Genes around RPL12P4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL12P4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL12P4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL12P4 Gene

Proteins for RPL12P4 Gene

Post-translational modifications for RPL12P4 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL12P4 Gene

Domains & Families for RPL12P4 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL12P4 Gene

Function for RPL12P4 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL12P4 Gene

Localization for RPL12P4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL12P4 Gene

Pathways & Interactions for RPL12P4 Gene

SuperPathways for RPL12P4 Gene

No Data Available

Interacting Proteins for RPL12P4 Gene

Gene Ontology (GO) - Biological Process for RPL12P4 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL12P4 Gene

Drugs & Compounds for RPL12P4 Gene

No Compound Related Data Available

Transcripts for RPL12P4 Gene

mRNA/cDNA for RPL12P4 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for RPL12P4 Gene

No ASD Table

Relevant External Links for RPL12P4 Gene

GeneLoc Exon Structure for
RPL12P4
ECgene alternative splicing isoforms for
RPL12P4

Expression for RPL12P4 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL12P4 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL12P4 Gene:

RPL12P4
genes like me logo Genes that share expression patterns with RPL12P4: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL12P4 Gene

Orthologs for RPL12P4 Gene

Evolution for RPL12P4 Gene

ENSEMBL:
Gene Tree for RPL12P4 (if available)
TreeFam:
Gene Tree for RPL12P4 (if available)

No data available for Orthologs for RPL12P4 Gene

Paralogs for RPL12P4 Gene

No data available for Paralogs for RPL12P4 Gene

Variants for RPL12P4 Gene

Relevant External Links for RPL12P4 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL12P4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL12P4 Gene

Disorders for RPL12P4 Gene

Relevant External Links for RPL12P4

Genetic Association Database (GAD)
RPL12P4

No disorders were found for RPL12P4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL12P4 Gene

Publications for RPL12P4 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. Genomewide pharmacogenomic study of metabolic side effects to antipsychotic drugs. (PMID: 20195266) Adkins D.E. … van den Oord E.J. (Mol. Psychiatry 2011) 46 64
  3. Genome-wide association with select biomarker traits in the Framingham Heart Study. (PMID: 17903293) Benjamin E.J. … Vasan R.S. (BMC Med. Genet. 2007) 46 64
  4. Genome-wide association with bone mass and geometry in the Framingham Heart Study. (PMID: 17903296) Kiel D.P. … Karasik D. (BMC Med. Genet. 2007) 46 64

Products for RPL12P4 Gene

Sources for RPL12P4 Gene

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