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Aliases for RPL12P38 Gene

Aliases for RPL12P38 Gene

  • Ribosomal Protein L12 Pseudogene 38 2 3 5
  • RPL12_14_1564 3

External Ids for RPL12P38 Gene

Previous GeneCards Identifiers for RPL12P38 Gene

  • GC17M055867
  • GC17M058513

Summaries for RPL12P38 Gene

GeneCards Summary for RPL12P38 Gene

RPL12P38 (Ribosomal Protein L12 Pseudogene 38) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL12P38 Gene

Genomics for RPL12P38 Gene

Regulatory Elements for RPL12P38 Gene

Enhancers for RPL12P38 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH17F060435 1.3 Ensembl ENCODE 0.8 -0.1 -107 1.1 HDGF PKNOX1 WRNIP1 SIN3A ARID4B ZNF2 SLC30A9 GLIS2 ZNF143 DEK C17orf64 HEATR6 CA4 RPL12P38 GC17M060489
GH17F060437 0.9 Ensembl 0.8 -1.5 -1505 0.6 ELF3 HDGF SIN3A YBX1 ZSCAN9 ZNF48 GLIS2 ELK1 THAP11 EGR2 RPL12P38 GC17M060489
GH17F060439 0.8 Ensembl 0.8 -3.5 -3505 0.6 DRAP1 GTF2F1 TFAP4 SAP130 CEBPG YY1 TEAD3 RARA FOXK2 SCRT2 RPL12P38 GC17M060489
GH17F060442 1 Ensembl ENCODE 0.4 -6.7 -6705 0.6 ELF3 PKNOX1 SAP130 ARID4B CEBPG ZSCAN9 ZBTB40 YY1 TEAD3 ZNF335 RPL12P38 GC17M060489
GH17F060467 1.2 Ensembl ENCODE 0.3 -33.3 -33297 3.0 HDGF HDAC1 PKNOX1 ARNT TBL1XR1 NFRKB RAD21 ZEB1 RFX5 CHAMP1 RPL32P32 PPM1D RPS6KB1 HEATR6 CLTC APPBP2 GC17M060489 RPL12P38
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL12P38 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL12P38 Gene

Chromosome:
17
Start:
60,433,678 bp from pter
End:
60,435,996 bp from pter
Size:
2,319 bases
Orientation:
Minus strand

Genomic View for RPL12P38 Gene

Genes around RPL12P38 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL12P38 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL12P38 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL12P38 Gene

Proteins for RPL12P38 Gene

Post-translational modifications for RPL12P38 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL12P38 Gene

Domains & Families for RPL12P38 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL12P38 Gene

Function for RPL12P38 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL12P38 Gene

Localization for RPL12P38 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL12P38 Gene

Pathways & Interactions for RPL12P38 Gene

SuperPathways for RPL12P38 Gene

No Data Available

Interacting Proteins for RPL12P38 Gene

Gene Ontology (GO) - Biological Process for RPL12P38 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL12P38 Gene

Transcripts for RPL12P38 Gene

mRNA/cDNA for RPL12P38 Gene

(1) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for RPL12P38 Gene

Ribosomal protein L12 pseudogene 38:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for RPL12P38 Gene

No ASD Table

Relevant External Links for RPL12P38 Gene

GeneLoc Exon Structure for
RPL12P38
ECgene alternative splicing isoforms for
RPL12P38

Expression for RPL12P38 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL12P38 Gene

mRNA differential expression in normal tissues according to GTEx for RPL12P38 Gene

This gene is overexpressed in Testis (x10.6).

NURSA nuclear receptor signaling pathways regulating expression of RPL12P38 Gene:

RPL12P38

SOURCE GeneReport for Unigene cluster for RPL12P38 Gene:

Hs.631738
genes like me logo Genes that share expression patterns with RPL12P38: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL12P38 Gene

Orthologs for RPL12P38 Gene

Evolution for RPL12P38 Gene

ENSEMBL:
Gene Tree for RPL12P38 (if available)
TreeFam:
Gene Tree for RPL12P38 (if available)

No data available for Orthologs for RPL12P38 Gene

Paralogs for RPL12P38 Gene

No data available for Paralogs for RPL12P38 Gene

Variants for RPL12P38 Gene

Relevant External Links for RPL12P38 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL12P38

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL12P38 Gene

Disorders for RPL12P38 Gene

Relevant External Links for RPL12P38

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
RPL12P38

No disorders were found for RPL12P38 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL12P38 Gene

Publications for RPL12P38 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL12P38 Gene

Sources for RPL12P38 Gene

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