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Aliases for RPL12P23 Gene

Subcategory (RNA class) for RPL12P23 Gene

lncRNA

Aliases for RPL12P23 Gene

  • Ribosomal Protein L12 Pseudogene 23 2 3 5
  • RPL12_7_777 3

External Ids for RPL12P23 Gene

ORGUL Members for RPL12P23 Gene

Previous GeneCards Identifiers for RPL12P23 Gene

  • GC06U901604
  • GC06P170515
  • GC06P170516

Summaries for RPL12P23 Gene

GeneCards Summary for RPL12P23 Gene

RPL12P23 (Ribosomal Protein L12 Pseudogene 23) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL12P23 Gene

Genomics for RPL12P23 Gene

Regulatory Elements for RPL12P23 Gene

Enhancers for RPL12P23 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06F170305 1.1 ENCODE 16.3 +107.4 107361 3.4 HDGF PKNOX1 CREB3L1 MLX ARID4B SIN3A DMAP1 ZNF2 SLC30A9 ZNF143 TBP RPL12P23 OR4F7P LOC101929692 FAM120B ENSG00000266896 LOC102724511 PSMB1 DLL1 MIR4644
GH06F170151 1.5 FANTOM5 Ensembl ENCODE 7.7 -46.9 -46884 3.2 HDGF PKNOX1 INSM2 KLF17 NFXL1 ZNF366 SCRT2 FOS EGR2 ZNF263 ENSG00000273100 LOC102724511 RPL12P23 FAM120B TCTE3 LOC101929614
GH06F170177 1 Ensembl ENCODE 9.8 -20.9 -20921 2.1 ZNF263 CTCF MCM3 JUN MAX MNT RAD21 YY1 GATA3 POLR2A ENSG00000273100 RPL12P23
GH06F170147 1.2 FANTOM5 Ensembl ENCODE 7.7 -51.7 -51694 1.8 ZFHX2 NRF1 SMAD4 MLLT1 NR2F6 MNT ZNF48 ENSG00000273100 LOC102724511 RPL12P23 TCTE3 FAM120B PHF10 ERMARD LOC101929614
GH06F170173 0.6 Ensembl ENCODE 9 -25.5 -25529 1.0 CTCF ENSG00000273100 RPL12P23 PIR53003 LOC105378153
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL12P23 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL12P23 Gene

Chromosome:
6
Start:
170,199,769 bp from pter
End:
170,200,258 bp from pter
Size:
490 bases
Orientation:
Plus strand

Genomic View for RPL12P23 Gene

Genes around RPL12P23 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL12P23 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL12P23 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL12P23 Gene

Proteins for RPL12P23 Gene

Post-translational modifications for RPL12P23 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL12P23 Gene

Domains & Families for RPL12P23 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL12P23 Gene

Function for RPL12P23 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL12P23 Gene

Localization for RPL12P23 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL12P23 Gene

Pathways & Interactions for RPL12P23 Gene

SuperPathways for RPL12P23 Gene

No Data Available

Interacting Proteins for RPL12P23 Gene

Gene Ontology (GO) - Biological Process for RPL12P23 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL12P23 Gene

Transcripts for RPL12P23 Gene

mRNA/cDNA for RPL12P23 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL12P23 Gene

No ASD Table

Relevant External Links for RPL12P23 Gene

GeneLoc Exon Structure for
RPL12P23
ECgene alternative splicing isoforms for
RPL12P23

Expression for RPL12P23 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL12P23 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL12P23 Gene:

RPL12P23
genes like me logo Genes that share expression patterns with RPL12P23: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL12P23 Gene

Orthologs for RPL12P23 Gene

Evolution for RPL12P23 Gene

ENSEMBL:
Gene Tree for RPL12P23 (if available)
TreeFam:
Gene Tree for RPL12P23 (if available)

No data available for Orthologs for RPL12P23 Gene

Paralogs for RPL12P23 Gene

No data available for Paralogs for RPL12P23 Gene

Variants for RPL12P23 Gene

Relevant External Links for RPL12P23 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL12P23

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL12P23 Gene

Disorders for RPL12P23 Gene

No disorders were found for RPL12P23 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL12P23 Gene

Publications for RPL12P23 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL12P23 Gene

Sources for RPL12P23 Gene

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