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Aliases for RPL12P23 Gene

Subcategory (RNA class) for RPL12P23 Gene

lncRNA

Aliases for RPL12P23 Gene

  • Ribosomal Protein L12 Pseudogene 23 2 3 5
  • RPL12_7_777 3

External Ids for RPL12P23 Gene

ORGUL Members for RPL12P23 Gene

Previous GeneCards Identifiers for RPL12P23 Gene

  • GC06U901604
  • GC06P170515
  • GC06P170516

Summaries for RPL12P23 Gene

GeneCards Summary for RPL12P23 Gene

RPL12P23 (Ribosomal Protein L12 Pseudogene 23) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for RPL12P23 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL12P23 Gene

Genomics for RPL12P23 Gene

GeneHancer (GH) Regulatory Elements for RPL12P23 Gene

Promoters and enhancers for RPL12P23 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I170151 Enhancer 1.3 FANTOM5 Ensembl ENCODE 7.7 -47.3 -47297 2.3 PKNOX1 ATF1 NFIB INSM2 KLF17 RAD21 ZNF366 SCRT2 FOS ZNF214 ENSG00000273100 LINC00242 LINC02519 ENSG00000272848 LINC00574 RPL12P23 FAM120B TCTE3 LOC101929614 LOC102724511
GH06I170177 Enhancer 0.9 Ensembl ENCODE 9.8 -20.9 -20921 2.1 CTCF FOXA2 CLOCK NFIB JUN MAX RAD21 YY1 GATA3 HNF4G ENSG00000273100 RPL12P23
GH06I170147 Enhancer 1 FANTOM5 Ensembl ENCODE 7.7 -51.8 -51760 1.7 ZFHX2 SMAD4 NR2F6 ZNF48 RAD21 LOC101929614 ENSG00000273100 LOC102724511 RPL12P23 TCTE3 FAM120B PHF10 ERMARD
GH06I170144 Enhancer 0.7 ENCODE 7.7 -54.7 -54671 1 NCOA3 FOXA2 SUZ12 MAX YBX1 RAD21 YY1 TCF12 LCORL HNF4G LOC101929614 ENSG00000273100 ERMARD FAM120B WDR27 LINC02519 TCTE3 ENSG00000232640 TBP RPL12P23
GH06I170176 Enhancer 0.5 Ensembl 9.7 -22.6 -22558 0.9 ZNF148 HDGF ZFHX2 L3MBTL2 TCF7L2 EGR2 ENSG00000273100 PIR53003 RPL12P23 LOC102724511
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL12P23 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL12P23 Gene

Genomic Locations for RPL12P23 Gene
chr6:170,199,769-170,200,258
(GRCh38/hg38)
Size:
490 bases
Orientation:
Plus strand
chr6:170,514,993-170,515,482
(GRCh37/hg19)

Genomic View for RPL12P23 Gene

Genes around RPL12P23 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL12P23 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL12P23 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL12P23 Gene

Proteins for RPL12P23 Gene

Post-translational modifications for RPL12P23 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL12P23 Gene

Domains & Families for RPL12P23 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL12P23 Gene

Function for RPL12P23 Gene

Phenotypes From GWAS Catalog for RPL12P23 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL12P23 Gene

Localization for RPL12P23 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL12P23 Gene

Pathways & Interactions for RPL12P23 Gene

SuperPathways for RPL12P23 Gene

No Data Available

Interacting Proteins for RPL12P23 Gene

Gene Ontology (GO) - Biological Process for RPL12P23 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL12P23 Gene

Drugs & Compounds for RPL12P23 Gene

No Compound Related Data Available

Transcripts for RPL12P23 Gene

mRNA/cDNA for RPL12P23 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL12P23 Gene

No ASD Table

Relevant External Links for RPL12P23 Gene

GeneLoc Exon Structure for
RPL12P23
ECgene alternative splicing isoforms for
RPL12P23

Expression for RPL12P23 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL12P23 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL12P23 Gene:

RPL12P23
genes like me logo Genes that share expression patterns with RPL12P23: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL12P23 Gene

Orthologs for RPL12P23 Gene

Evolution for RPL12P23 Gene

ENSEMBL:
Gene Tree for RPL12P23 (if available)
TreeFam:
Gene Tree for RPL12P23 (if available)

No data available for Orthologs for RPL12P23 Gene

Paralogs for RPL12P23 Gene

No data available for Paralogs for RPL12P23 Gene

Variants for RPL12P23 Gene

Additional Variant Information for RPL12P23 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL12P23

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL12P23 Gene

Disorders for RPL12P23 Gene

No disorders were found for RPL12P23 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL12P23 Gene

Publications for RPL12P23 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPL12P23 Gene

Sources for RPL12P23 Gene

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