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Aliases for RPL12P11 Gene

Aliases for RPL12P11 Gene

  • Ribosomal Protein L12 Pseudogene 11 2 3 5
  • Ribosomal Protein L12-Like 2 2 3
  • Ribosomal Protein S12 Pseudogene 11 3
  • RPL12_22_1703 3
  • DJ661I20.1 3
  • RPL12L2 3

External Ids for RPL12P11 Gene

Previous HGNC Symbols for RPL12P11 Gene

  • RPL12L2

Previous GeneCards Identifiers for RPL12P11 Gene

  • GC20P039610
  • GC20P040175
  • GC20P036913

Summaries for RPL12P11 Gene

GeneCards Summary for RPL12P11 Gene

RPL12P11 (Ribosomal Protein L12 Pseudogene 11) is a Pseudogene.

Additional gene information for RPL12P11 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL12P11 Gene

Genomics for RPL12P11 Gene

GeneHancer (GH) Regulatory Elements for RPL12P11 Gene

Promoters and enhancers for RPL12P11 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH20I041576 Enhancer 0.8 ENCODE 0.3 +30.2 30216 1.6 HDGF ELF3 FOXA2 ARID4B THRB ZSCAN9 RARA YY1 ATF7 CREM RPL12P11 CHD6
GH20I041574 Enhancer 0.6 ENCODE 0.3 +27.5 27515 0.8 FOXA2 TEAD1 NFYC SP1 HNF4G HNF4A BCLAF1 HOMEZ RPL12P11 CHD6
GH20I041579 Enhancer 0.6 ENCODE 0.3 +32.8 32826 1.9 HLF NFIL3 PRDM6 ZNF316 CEBPA ZBTB33 NR2F6 MAFK CHD6 RPL12P11
GH20I041617 Enhancer 0.7 ENCODE 0.2 +69.1 69102 0.2 ELF3 FOXA2 SAP130 ARID4B CEBPG ZNF600 HOMEZ GATAD2A SOX5 KLF6 CHD6 RPL12P11
GH20I041573 Enhancer 0.4 Ensembl 0.3 +26.6 26566 0.2 HDGF ZNF398 RPL12P11 CHD6
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL12P11 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL12P11 Gene

Genomic Locations for RPL12P11 Gene
chr20:41,547,335-41,547,966
(GRCh38/hg38)
Size:
632 bases
Orientation:
Plus strand
chr20:40,175,974-40,176,605
(GRCh37/hg19)

Genomic View for RPL12P11 Gene

Genes around RPL12P11 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL12P11 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL12P11 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL12P11 Gene

Proteins for RPL12P11 Gene

Post-translational modifications for RPL12P11 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL12P11 Gene

Domains & Families for RPL12P11 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL12P11 Gene

Function for RPL12P11 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL12P11 Gene

Localization for RPL12P11 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL12P11 Gene

Pathways & Interactions for RPL12P11 Gene

SuperPathways for RPL12P11 Gene

No Data Available

Interacting Proteins for RPL12P11 Gene

Gene Ontology (GO) - Biological Process for RPL12P11 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL12P11 Gene

Drugs & Compounds for RPL12P11 Gene

No Compound Related Data Available

Transcripts for RPL12P11 Gene

mRNA/cDNA for RPL12P11 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL12P11 Gene

No ASD Table

Relevant External Links for RPL12P11 Gene

GeneLoc Exon Structure for
RPL12P11
ECgene alternative splicing isoforms for
RPL12P11

Expression for RPL12P11 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL12P11 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL12P11 Gene:

RPL12P11
genes like me logo Genes that share expression patterns with RPL12P11: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL12P11 Gene

Orthologs for RPL12P11 Gene

Evolution for RPL12P11 Gene

ENSEMBL:
Gene Tree for RPL12P11 (if available)
TreeFam:
Gene Tree for RPL12P11 (if available)

No data available for Orthologs for RPL12P11 Gene

Paralogs for RPL12P11 Gene

No data available for Paralogs for RPL12P11 Gene

Variants for RPL12P11 Gene

Additional Variant Information for RPL12P11 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL12P11

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL12P11 Gene

Disorders for RPL12P11 Gene

Additional Disease Information for RPL12P11

Genetic Association Database
(GAD)

No disorders were found for RPL12P11 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL12P11 Gene

Publications for RPL12P11 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58
  2. A genome-wide association study of sporadic ALS in a homogenous Irish population. (PMID: 18057069) Cronin S … Hardiman O (Human molecular genetics 2008) 44 58
  3. Genome-wide association with bone mass and geometry in the Framingham Heart Study. (PMID: 17903296) Kiel DP … Karasik D (BMC medical genetics 2007) 44 58
  4. Genome-wide association with diabetes-related traits in the Framingham Heart Study. (PMID: 17903298) Meigs JB … Dupuis J (BMC medical genetics 2007) 44 58

Products for RPL12P11 Gene

Sources for RPL12P11 Gene

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