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Aliases for RPL10AP7 Gene

Aliases for RPL10AP7 Gene

  • Ribosomal Protein L10a Pseudogene 7 2 3
  • RP11-115L11.1 5
  • RPL10A_2_460 3

External Ids for RPL10AP7 Gene

Previous GeneCards Identifiers for RPL10AP7 Gene

  • GC04M015342

Summaries for RPL10AP7 Gene

GeneCards Summary for RPL10AP7 Gene

RPL10AP7 (Ribosomal Protein L10a Pseudogene 7) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL10AP7 Gene

Genomics for RPL10AP7 Gene

Regulatory Elements for RPL10AP7 Gene

Enhancers for RPL10AP7 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH04F015723 0.2 ENCODE 13.3 +7.9 7937 1.2 STAT1 CEBPB ZNF384 EP300 ZKSCAN1 GTF3C2 STAT3 FOS MAFK RPL10AP7 CD38 BST1
GH04F015716 0.8 Ensembl ENCODE 7.2 +14.2 14210 1.3 SP5 JUN HNF4G RAD21 YY1 FGFBP2 PROM1 RPL10AP7 BST1
GH04F015651 0.8 FANTOM5 ENCODE 7 +77.6 77565 5.8 HDGF PKNOX1 ATF1 SIN3A DMAP1 ZNF48 YY1 ZNF766 GLIS2 ELK1 FBXL5 FAM200B ENSG00000273133 RPL10AP7 PROM1 BST1 GC04P015599
GH04F015753 1.3 FANTOM5 Ensembl ENCODE 5.8 -23.8 -23753 4.4 CTCF ZNF146 JUN MAX ZMYM3 RAD21 CREM TCF7L2 STAT1 MTA2 CD38 RPL10AP7 TAPT1 FBXL5 LOC100288771
GH04F015694 0.9 Ensembl ENCODE 5 +36.5 36528 2.2 RFX1 JUND BCL11A TEAD4 SIN3A FOS CD38 FAM200B BST1 RPL10AP7 FBXL5
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RPL10AP7 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL10AP7 Gene

Chromosome:
4
Start:
15,730,930 bp from pter
End:
15,731,661 bp from pter
Size:
732 bases
Orientation:
Minus strand

Genomic View for RPL10AP7 Gene

Genes around RPL10AP7 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL10AP7 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL10AP7 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL10AP7 Gene

Proteins for RPL10AP7 Gene

Post-translational modifications for RPL10AP7 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL10AP7 Gene

Domains & Families for RPL10AP7 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL10AP7 Gene

Function for RPL10AP7 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL10AP7 Gene

Localization for RPL10AP7 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL10AP7 Gene

Pathways & Interactions for RPL10AP7 Gene

SuperPathways for RPL10AP7 Gene

No Data Available

Interacting Proteins for RPL10AP7 Gene

Gene Ontology (GO) - Biological Process for RPL10AP7 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL10AP7 Gene

Transcripts for RPL10AP7 Gene

mRNA/cDNA for RPL10AP7 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL10AP7 Gene

No ASD Table

Relevant External Links for RPL10AP7 Gene

GeneLoc Exon Structure for
RPL10AP7
ECgene alternative splicing isoforms for
RPL10AP7

Expression for RPL10AP7 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL10AP7 Gene

mRNA differential expression in normal tissues according to GTEx for RPL10AP7 Gene

This gene is overexpressed in Whole Blood (x26.0).

NURSA nuclear receptor signaling pathways regulating expression of RPL10AP7 Gene:

RPL10AP7
genes like me logo Genes that share expression patterns with RPL10AP7: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL10AP7 Gene

Orthologs for RPL10AP7 Gene

Evolution for RPL10AP7 Gene

ENSEMBL:
Gene Tree for RPL10AP7 (if available)
TreeFam:
Gene Tree for RPL10AP7 (if available)

No data available for Orthologs for RPL10AP7 Gene

Paralogs for RPL10AP7 Gene

No data available for Paralogs for RPL10AP7 Gene

Variants for RPL10AP7 Gene

Relevant External Links for RPL10AP7 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL10AP7

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL10AP7 Gene

Disorders for RPL10AP7 Gene

Relevant External Links for RPL10AP7

Genetic Association Database (GAD)
RPL10AP7

No disorders were found for RPL10AP7 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL10AP7 Gene

Publications for RPL10AP7 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. Meta-analysis of Parkinson's disease: identification of a novel locus, RIT2. (PMID: 22451204) Pankratz N. … Foroud T. (Ann. Neurol. 2012) 46 64
  3. Genome-wide association study confirms BST1 and suggests a locus on 12q24 as the risk loci for Parkinson's disease in the European population. (PMID: 21084426) Saad M. … Brice A. (Hum. Mol. Genet. 2011) 46 64
  4. Imputation of sequence variants for identification of genetic risks for Parkinson's disease: a meta-analysis of genome-wide association studies. (PMID: 21292315) . … Wood N.W. (Lancet 2011) 46 64
  5. Genome-wide association study identifies common variants at four loci as genetic risk factors for Parkinson's disease. (PMID: 19915576) Satake W. … Toda T. (Nat. Genet. 2009) 46 64

Products for RPL10AP7 Gene

Sources for RPL10AP7 Gene

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