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Aliases for RPL10AP7 Gene

Aliases for RPL10AP7 Gene

  • Ribosomal Protein L10a Pseudogene 7 2 3
  • RPL10A_2_460 3
  • AC114744.1 5

External Ids for RPL10AP7 Gene

Previous GeneCards Identifiers for RPL10AP7 Gene

  • GC04M015342

Summaries for RPL10AP7 Gene

GeneCards Summary for RPL10AP7 Gene

RPL10AP7 (Ribosomal Protein L10a Pseudogene 7) is a Pseudogene.

Additional gene information for RPL10AP7 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL10AP7 Gene

Genomics for RPL10AP7 Gene

GeneHancer (GH) Regulatory Elements for RPL10AP7 Gene

Promoters and enhancers for RPL10AP7 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04I015729 Enhancer 0.5 dbSUPER 563 +0.7 687 2.9 CTCF ZNF654 TRIM22 ZNF143 SMC3 RAD21 RPL10AP7 BST1 CD38 FAM200B FBXL5
GH04I015651 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 7 +77.6 77565 5.8 HDGF PKNOX1 ATF1 SIN3A DMAP1 ZNF48 YY1 ZNF766 GLIS2 ZNF143 FBXL5 FAM200B ENSG00000273133 RPL10AP7 PROM1 BST1 GC04P015599
GH04I015676 Promoter/Enhancer 2.8 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 4.6 +50.6 50561 8.4 HDGF FOXA2 PKNOX1 CLOCK SMAD1 ARID4B SIN3A DMAP1 ZNF2 YY1 FBXL5 FAM200B ENSG00000273133 BST1 RPL10AP7 GC04P015599
GH04I015736 Enhancer 0.9 dbSUPER 10.9 -9.2 -9189 8.6 FOXA2 MLX DNMT3B ZSCAN9 RAD21 RARA YY1 ZNF766 CREM THAP11 FAM200B CD38 BST1 RPL10AP7 FBXL5 ENSG00000273133 LOC100288771
GH04I015753 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 5.8 -23.8 -23752 4.4 CTCF STAT1 RXRA JUN NR2F1 MAX EBF1 DPF2 IRF4 RAD21 CD38 RPL10AP7 TAPT1 FBXL5 LOC100288771 BST1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL10AP7 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL10AP7 Gene

Genomic Locations for RPL10AP7 Gene
chr4:15,730,930-15,731,661
(GRCh38/hg38)
Size:
732 bases
Orientation:
Minus strand
chr4:15,732,553-15,733,284
(GRCh37/hg19)

Genomic View for RPL10AP7 Gene

Genes around RPL10AP7 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL10AP7 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL10AP7 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL10AP7 Gene

Proteins for RPL10AP7 Gene

Post-translational modifications for RPL10AP7 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL10AP7 Gene

Domains & Families for RPL10AP7 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL10AP7 Gene

Function for RPL10AP7 Gene

Phenotypes From GWAS Catalog for RPL10AP7 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL10AP7 Gene

Localization for RPL10AP7 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL10AP7 Gene

Pathways & Interactions for RPL10AP7 Gene

SuperPathways for RPL10AP7 Gene

No Data Available

Interacting Proteins for RPL10AP7 Gene

Gene Ontology (GO) - Biological Process for RPL10AP7 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL10AP7 Gene

Drugs & Compounds for RPL10AP7 Gene

No Compound Related Data Available

Transcripts for RPL10AP7 Gene

mRNA/cDNA for RPL10AP7 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL10AP7 Gene

No ASD Table

Relevant External Links for RPL10AP7 Gene

GeneLoc Exon Structure for
RPL10AP7
ECgene alternative splicing isoforms for
RPL10AP7

Expression for RPL10AP7 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL10AP7 Gene

mRNA differential expression in normal tissues according to GTEx for RPL10AP7 Gene

This gene is overexpressed in Whole Blood (x26.0).

NURSA nuclear receptor signaling pathways regulating expression of RPL10AP7 Gene:

RPL10AP7
genes like me logo Genes that share expression patterns with RPL10AP7: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL10AP7 Gene

Orthologs for RPL10AP7 Gene

Evolution for RPL10AP7 Gene

ENSEMBL:
Gene Tree for RPL10AP7 (if available)
TreeFam:
Gene Tree for RPL10AP7 (if available)

No data available for Orthologs for RPL10AP7 Gene

Paralogs for RPL10AP7 Gene

No data available for Paralogs for RPL10AP7 Gene

Variants for RPL10AP7 Gene

Additional Variant Information for RPL10AP7 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL10AP7

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL10AP7 Gene

Disorders for RPL10AP7 Gene

Additional Disease Information for RPL10AP7

Genetic Association Database
(GAD)

No disorders were found for RPL10AP7 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL10AP7 Gene

Publications for RPL10AP7 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58
  2. Meta-analysis of Parkinson's disease: identification of a novel locus, RIT2. (PMID: 22451204) Pankratz N … PD GWAS Consortium (Annals of neurology 2012) 44 58
  3. Genome-wide association study confirms BST1 and suggests a locus on 12q24 as the risk loci for Parkinson's disease in the European population. (PMID: 21084426) Saad M … French Parkinson's Disease Genetics Study Group (Human molecular genetics 2011) 44 58
  4. Imputation of sequence variants for identification of genetic risks for Parkinson's disease: a meta-analysis of genome-wide association studies. (PMID: 21292315) International Parkinson Disease Genomics Consortium … Wood NW (Lancet (London, England) 2011) 44 58
  5. Genome-wide association study identifies common variants at four loci as genetic risk factors for Parkinson's disease. (PMID: 19915576) Satake W … Toda T (Nature genetics 2009) 44 58

Products for RPL10AP7 Gene

Sources for RPL10AP7 Gene

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