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Aliases for RPL10AP6 Gene

Aliases for RPL10AP6 Gene

  • Ribosomal Protein L10a Pseudogene 6 2 3
  • RPL10A_1_376 3
  • AC096919.1 5

External Ids for RPL10AP6 Gene

Summaries for RPL10AP6 Gene

GeneCards Summary for RPL10AP6 Gene

RPL10AP6 (Ribosomal Protein L10a Pseudogene 6) is a Pseudogene.

Additional gene information for RPL10AP6 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL10AP6 Gene

Genomics for RPL10AP6 Gene

Regulatory Elements for RPL10AP6 Gene

Enhancers for RPL10AP6 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03H061249 1.1 ENCODE 10.4 +491.4 491420 4.3 HDGF PKNOX1 MLX ARNT ZFP64 SIN3A ARID4B FEZF1 DMAP1 ZNF2 RPL10AP6 FHIT LOC105377115 GC03P061398
GH03H061649 0.9 ENCODE 10.4 +92.9 92867 1.4 PKNOX1 INSM2 FEZF1 NFXL1 ZNF302 ZNF366 ZSCAN5C ZNF362 OVOL3 TSHZ1 PTPRG RPL10AP6 GC03P061682
GH03H061871 0.6 ENCODE 13.6 -128.6 -128643 1.5 MAX USF2 GATAD2B PAX8 RFX5 ZNF664 NONO CTBP1 ZNF600 ZNF18 RPL10AP6 RNU2-10P GC03P061757 GC03P062066
GH03H061742 0.2 Ensembl 0.7 +0.3 336 0.4 ENSG00000252420 GC03M061743 RPL10AP6 GC03M061744
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL10AP6 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL10AP6 Gene

Genomic Locations for RPL10AP6 Gene
chr3:61,742,424-61,743,137
(GRCh38/hg38)
Size:
714 bases
Orientation:
Minus strand
chr3:61,728,098-61,728,811
(GRCh37/hg19)

Genomic View for RPL10AP6 Gene

Genes around RPL10AP6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL10AP6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL10AP6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL10AP6 Gene

Proteins for RPL10AP6 Gene

Post-translational modifications for RPL10AP6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL10AP6 Gene

Domains & Families for RPL10AP6 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL10AP6 Gene

Function for RPL10AP6 Gene

Phenotypes From GWAS Catalog for RPL10AP6 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL10AP6 Gene

Localization for RPL10AP6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL10AP6 Gene

Pathways & Interactions for RPL10AP6 Gene

SuperPathways for RPL10AP6 Gene

No Data Available

Interacting Proteins for RPL10AP6 Gene

Gene Ontology (GO) - Biological Process for RPL10AP6 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL10AP6 Gene

Drugs & Compounds for RPL10AP6 Gene

No Compound Related Data Available

Transcripts for RPL10AP6 Gene

mRNA/cDNA for RPL10AP6 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL10AP6 Gene

No ASD Table

Relevant External Links for RPL10AP6 Gene

GeneLoc Exon Structure for
RPL10AP6
ECgene alternative splicing isoforms for
RPL10AP6

Expression for RPL10AP6 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL10AP6 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL10AP6 Gene:

RPL10AP6
genes like me logo Genes that share expression patterns with RPL10AP6: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL10AP6 Gene

Orthologs for RPL10AP6 Gene

Evolution for RPL10AP6 Gene

ENSEMBL:
Gene Tree for RPL10AP6 (if available)
TreeFam:
Gene Tree for RPL10AP6 (if available)

No data available for Orthologs for RPL10AP6 Gene

Paralogs for RPL10AP6 Gene

No data available for Paralogs for RPL10AP6 Gene

Variants for RPL10AP6 Gene

Relevant External Links for RPL10AP6 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL10AP6

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL10AP6 Gene

Disorders for RPL10AP6 Gene

Relevant External Links for RPL10AP6

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
RPL10AP6

No disorders were found for RPL10AP6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL10AP6 Gene

Publications for RPL10AP6 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 60
  2. The human ribosomal protein genes: sequencing and comparative analysis of 73 genes. (PMID: 11875025) Yoshihama M … Kenmochi N (Genome research 2002) 3 60

Products for RPL10AP6 Gene

Sources for RPL10AP6 Gene

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