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Aliases for RPL10AP6 Gene

Aliases for RPL10AP6 Gene

  • Ribosomal Protein L10a Pseudogene 6 2 3
  • RPL10A_1_376 3

External Ids for RPL10AP6 Gene

Summaries for RPL10AP6 Gene

GeneCards Summary for RPL10AP6 Gene

RPL10AP6 (Ribosomal Protein L10a Pseudogene 6) is a Pseudogene.

Additional gene information for RPL10AP6 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL10AP6 Gene

Genomics for RPL10AP6 Gene

GeneHancer (GH) Regulatory Elements for RPL10AP6 Gene

Promoters and enhancers for RPL10AP6 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03I061742 Enhancer 0.2 Ensembl 550.8 +0.3 336 0.4 RPL10AP6 GC03M061744 GC03M061743 ENSG00000252420 PTPRG
GH03I061249 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 10.4 +491.4 491420 4.3 HDGF PKNOX1 MLX ARNT ZFP64 ARID4B SIN3A FEZF1 DMAP1 ZNF2 FHIT LOC105377115 RPL10AP6 GC03P061398
GH03I061871 Enhancer 0.7 ENCODE 13.6 -128.6 -128643 1.5 USF1 MAX NEUROD1 SIN3A USF2 GATAD2B PAX8 RFX5 ZNF664 ZNF335 RPL10AP6 RNU2-10P GC03P061757 GC03P062066 PTPRG
GH03I061649 Enhancer 0.9 ENCODE 10.4 +92.9 92866 1.4 PKNOX1 INSM2 NFXL1 FEZF1 ZNF335 ZNF213 ZNF302 ZNF366 ZSCAN5C ZNF362 PTPRG RPL10AP6 GC03P061682
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPL10AP6 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPL10AP6 Gene

Genomic Locations for RPL10AP6 Gene
chr3:61,742,424-61,743,137
(GRCh38/hg38)
Size:
714 bases
Orientation:
Minus strand
chr3:61,728,098-61,728,811
(GRCh37/hg19)

Genomic View for RPL10AP6 Gene

Genes around RPL10AP6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL10AP6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL10AP6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL10AP6 Gene

Proteins for RPL10AP6 Gene

Post-translational modifications for RPL10AP6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL10AP6 Gene

Domains & Families for RPL10AP6 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL10AP6 Gene

Function for RPL10AP6 Gene

Phenotypes From GWAS Catalog for RPL10AP6 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL10AP6 Gene

Localization for RPL10AP6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPL10AP6 Gene

Pathways & Interactions for RPL10AP6 Gene

SuperPathways for RPL10AP6 Gene

No Data Available

Interacting Proteins for RPL10AP6 Gene

Gene Ontology (GO) - Biological Process for RPL10AP6 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL10AP6 Gene

Drugs & Compounds for RPL10AP6 Gene

No Compound Related Data Available

Transcripts for RPL10AP6 Gene

mRNA/cDNA for RPL10AP6 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPL10AP6 Gene

No ASD Table

Relevant External Links for RPL10AP6 Gene

GeneLoc Exon Structure for
RPL10AP6
ECgene alternative splicing isoforms for
RPL10AP6

Expression for RPL10AP6 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL10AP6 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL10AP6 Gene:

RPL10AP6
genes like me logo Genes that share expression patterns with RPL10AP6: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL10AP6 Gene

Orthologs for RPL10AP6 Gene

Evolution for RPL10AP6 Gene

ENSEMBL:
Gene Tree for RPL10AP6 (if available)
TreeFam:
Gene Tree for RPL10AP6 (if available)

No data available for Orthologs for RPL10AP6 Gene

Paralogs for RPL10AP6 Gene

No data available for Paralogs for RPL10AP6 Gene

Variants for RPL10AP6 Gene

Additional Variant Information for RPL10AP6 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL10AP6

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL10AP6 Gene

Disorders for RPL10AP6 Gene

Additional Disease Information for RPL10AP6

No disorders were found for RPL10AP6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL10AP6 Gene

Publications for RPL10AP6 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58
  2. The human ribosomal protein genes: sequencing and comparative analysis of 73 genes. (PMID: 11875025) Yoshihama M … Kenmochi N (Genome research 2002) 3 58

Products for RPL10AP6 Gene

Sources for RPL10AP6 Gene

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