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Aliases for RPL10AP2 Gene

Aliases for RPL10AP2 Gene

  • Ribosomal Protein L10a Pseudogene 2 2 3 5
  • RPL10A_5_900 3

External Ids for RPL10AP2 Gene

Previous GeneCards Identifiers for RPL10AP2 Gene

  • GC08U900354
  • GC08P048087
  • GC08P048187
  • GC08P048069

Summaries for RPL10AP2 Gene

GeneCards Summary for RPL10AP2 Gene

RPL10AP2 (Ribosomal Protein L10a Pseudogene 2) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL10AP2 Gene

Genomics for RPL10AP2 Gene

Regulatory Elements for RPL10AP2 Gene

Enhancers for RPL10AP2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH08F047959 1.2 ENCODE 19.2 +803.6 803550 3.5 PKNOX1 ARNT CREB3L1 MLX ARID4B SIN3A DMAP1 YY1 SLC30A9 ZNF143 PRKDC SNAI2 RPL29P19 ENSG00000253688 ENSG00000233858 RPL10AP2 LOC100420054 MCM4 PIR48725
GH08F047351 1.6 FANTOM5 Ensembl ENCODE 4.3 +198.8 198789 8.3 ATF1 MLX YY1 ZNF121 SP5 PPARG ZNF592 PBX2 ETV4 STAT3 CEBPD PRKDC SPIDR MCM4 LOC100420054 RPL10AP2 PIR60563 GC08M047258
GH08F047521 1.5 FANTOM5 Ensembl ENCODE 4.2 +367.7 367741 6.1 ELF3 ARID4B DMAP1 THRB RAD21 RARA YY1 CREM MIXL1 SP5 MCM4 RPL29P19 RPL10AP2 PRKDC CEBPD ENSG00000269924 LOC100420054
GH08F047376 1.5 FANTOM5 Ensembl ENCODE 4.2 +224.1 224094 10.0 ELF3 PKNOX1 SIN3A ZBTB40 RAD21 RARA SCRT2 CEBPB PPARG SMARCA4 MCM4 SPIDR RPL10AP2 PIR60563 GC08M047258
GH08F047429 1.4 FANTOM5 Ensembl ENCODE 4.3 +274.0 273995 3.4 HDAC1 ATF1 PKNOX1 RAD21 FOS CREM JUNB NCOA1 CEBPB ZEB2 PRKDC SPIDR RPL29P19 RPL10AP2 MCM4 LOC100420054 CEBPD PIR60563 GC08M047258
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL10AP2 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL10AP2 Gene

Chromosome:
8
Start:
47,157,087 bp from pter
End:
47,157,802 bp from pter
Size:
716 bases
Orientation:
Plus strand

Genomic View for RPL10AP2 Gene

Genes around RPL10AP2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL10AP2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL10AP2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL10AP2 Gene

Proteins for RPL10AP2 Gene

Post-translational modifications for RPL10AP2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL10AP2 Gene

Domains & Families for RPL10AP2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL10AP2 Gene

Function for RPL10AP2 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL10AP2 Gene

Localization for RPL10AP2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL10AP2 Gene

Pathways & Interactions for RPL10AP2 Gene

SuperPathways for RPL10AP2 Gene

No Data Available

Interacting Proteins for RPL10AP2 Gene

Gene Ontology (GO) - Biological Process for RPL10AP2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL10AP2 Gene

Transcripts for RPL10AP2 Gene

mRNA/cDNA for RPL10AP2 Gene

(5) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL10AP2 Gene

No ASD Table

Relevant External Links for RPL10AP2 Gene

GeneLoc Exon Structure for
RPL10AP2
ECgene alternative splicing isoforms for
RPL10AP2

Expression for RPL10AP2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPL10AP2 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL10AP2 Gene:

RPL10AP2
genes like me logo Genes that share expression patterns with RPL10AP2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL10AP2 Gene

Orthologs for RPL10AP2 Gene

Evolution for RPL10AP2 Gene

ENSEMBL:
Gene Tree for RPL10AP2 (if available)
TreeFam:
Gene Tree for RPL10AP2 (if available)

No data available for Orthologs for RPL10AP2 Gene

Paralogs for RPL10AP2 Gene

No data available for Paralogs for RPL10AP2 Gene

Variants for RPL10AP2 Gene

Relevant External Links for RPL10AP2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL10AP2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL10AP2 Gene

Disorders for RPL10AP2 Gene

Relevant External Links for RPL10AP2

Genetic Association Database (GAD)
RPL10AP2

No disorders were found for RPL10AP2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL10AP2 Gene

Publications for RPL10AP2 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL10AP2 Gene

Sources for RPL10AP2 Gene

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