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Aliases for RPL10AP12 Gene

Aliases for RPL10AP12 Gene

  • Ribosomal Protein L10a Pseudogene 12 2 3
  • RPL10A_7_1502 3
  • RP11-568J23.1 5

External Ids for RPL10AP12 Gene

Previous GeneCards Identifiers for RPL10AP12 Gene

  • GC16M084407

Summaries for RPL10AP12 Gene

GeneCards Summary for RPL10AP12 Gene

RPL10AP12 (Ribosomal Protein L10a Pseudogene 12) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL10AP12 Gene

Genomics for RPL10AP12 Gene

Regulatory Elements for RPL10AP12 Gene

Enhancers for RPL10AP12 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH16G085821 0.8 ENCODE 0.7 -4.7 -4743 0.2 ATF1 CBX3 PTBP1 NFIB ARID4B ZSCAN9 RAD21 RCOR1 SMARCA5 MIER1 RPL10AP12 ENSG00000279907
GH16G085822 1.3 FANTOM5 ENCODE 0.4 -5.1 -5133 0.4 ATF1 CREB3L1 ARID4B SIN3A ZNF2 ZNF48 ELK1 ZNF143 ZNF207 DEK IRF8 COX4I1 RPL10AP12 ENSG00000279907
GH16G085819 0.7 ENCODE 0.7 -2.8 -2793 0.2 HDGF CTCF ESRRA RAD21 ZNF143 SMC3 STAT1 ZNF654 TRIM22 REST RPL10AP12 ENSG00000279907
GH16G085844 1.4 FANTOM5 Ensembl ENCODE 0.3 -28.4 -28425 0.4 ELF3 FOXA2 MLX ARID4B ZSCAN9 RARA CREM MIXL1 MXD4 KAT8 IRF8 COX4I1 EMC8 ENSG00000279907 RPL10AP12
GH16G085828 1 Ensembl ENCODE 0.4 -13.0 -12977 1.7 CTCF KLF1 IRF2 MAX RAD21 ZNF697 TEAD3 ZFHX2 EGR2 STAT1 RPL10AP12 ENSG00000279907
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPL10AP12 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPL10AP12 Gene

Chromosome:
16
Start:
85,815,846 bp from pter
End:
85,816,567 bp from pter
Size:
722 bases
Orientation:
Minus strand

Genomic View for RPL10AP12 Gene

Genes around RPL10AP12 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL10AP12 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL10AP12 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL10AP12 Gene

Proteins for RPL10AP12 Gene

Post-translational modifications for RPL10AP12 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL10AP12 Gene

Domains & Families for RPL10AP12 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL10AP12 Gene

Function for RPL10AP12 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL10AP12 Gene

Localization for RPL10AP12 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL10AP12 Gene

Pathways & Interactions for RPL10AP12 Gene

SuperPathways for RPL10AP12 Gene

No Data Available

Interacting Proteins for RPL10AP12 Gene

Gene Ontology (GO) - Biological Process for RPL10AP12 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL10AP12 Gene

Transcripts for RPL10AP12 Gene

mRNA/cDNA for RPL10AP12 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPL10AP12 Gene

No ASD Table

Relevant External Links for RPL10AP12 Gene

GeneLoc Exon Structure for
RPL10AP12
ECgene alternative splicing isoforms for
RPL10AP12

Expression for RPL10AP12 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPL10AP12 Gene

Protein differential expression in normal tissues from HIPED for RPL10AP12 Gene

This gene is overexpressed in Brain (69.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from MOPED for RPL10AP12 Gene



Protein tissue co-expression partners for RPL10AP12 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL10AP12 Gene:

RPL10AP12
genes like me logo Genes that share expression patterns with RPL10AP12: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPL10AP12 Gene

Orthologs for RPL10AP12 Gene

Evolution for RPL10AP12 Gene

ENSEMBL:
Gene Tree for RPL10AP12 (if available)
TreeFam:
Gene Tree for RPL10AP12 (if available)

No data available for Orthologs for RPL10AP12 Gene

Paralogs for RPL10AP12 Gene

No data available for Paralogs for RPL10AP12 Gene

Variants for RPL10AP12 Gene

Relevant External Links for RPL10AP12 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL10AP12

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL10AP12 Gene

Disorders for RPL10AP12 Gene

No disorders were found for RPL10AP12 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPL10AP12 Gene

Publications for RPL10AP12 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64

Products for RPL10AP12 Gene

Sources for RPL10AP12 Gene

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