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Aliases for RPL10AP10 Gene

Aliases for RPL10AP10 Gene

  • Ribosomal Protein L10a Pseudogene 10 2 3
  • RPL10A_4_618 3

External Ids for RPL10AP10 Gene

Previous GeneCards Identifiers for RPL10AP10 Gene

  • GC05P137974
  • GC05P137946

Summaries for RPL10AP10 Gene

GeneCards Summary for RPL10AP10 Gene

RPL10AP10 (Ribosomal Protein L10a Pseudogene 10) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPL10AP10 Gene

Genomics for RPL10AP10 Gene

Regulatory Elements for RPL10AP10 Gene

Enhancers for RPL10AP10 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH05F138608 0.2 ENCODE 0.8 -0.4 -368 3.3 PKNOX1 ZNF493 SIN3A RAD21 ZNF23 ZNF302 ZNF366 RCOR1 FOS ZNF280D CDC23 HNRNPA0 LOC101928005 RPL10AP10 HSPA9
GH05F138602 0.8 Ensembl ENCODE 0.4 -7.1 -7108 1.7 MTA2 CBFB JUNB RELA RAD51 ZNF316 SMARCA4 EED IKZF1 MLLT1 RPL10AP10 HSPA9
GH05F138601 0.8 Ensembl ENCODE 0.4 -8.9 -8909 0.9 HDAC1 ESRRA BACH1 ZNF316 FOXK2 TRIM24 NFE2 NR2F6 MAFK NFE2L2 HSPA9 CTNNA1 RPL10AP10
GH05F138604 0.2 Ensembl 0.4 -5.1 -5055 1.6 HDGF PKNOX1 RFX1 MTA2 WRNIP1 IKZF1 HSPA9 SNORD63 ENSG00000222937 RPL10AP10
GH05F138578 1.3 Ensembl ENCODE 0.3 -31.3 -31309 0.9 BCOR CTCF CBX3 ESRRA PKNOX1 MAX RAD21 ZBTB40 RFX5 GATA3 KDM3B HNRNPA0 CTNNA1 ENSG00000238745 ENSG00000222937 ETF1 LOC105379194 HSPA9 RPL10AP10
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around RPL10AP10 on UCSC Golden Path with GeneCards custom track

Promoters for RPL10AP10 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001874219 845 201 CTCF ZNF146 STAT1 ZNF493 ZBTB7A RAD21 ZFHX2 SMARCA4 POLR2A ZNF366
ENSR00001874220 1245 200 STAT1 ZNF146 HLF ZNF493 CEBPB ZNF7 ZNF23 ZNF274 ZNF302 ZNF366

Genomic Location for RPL10AP10 Gene

Chromosome:
5
Start:
138,610,655 bp from pter
End:
138,620,964 bp from pter
Size:
10,310 bases
Orientation:
Plus strand

Genomic View for RPL10AP10 Gene

Genes around RPL10AP10 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPL10AP10 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPL10AP10 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPL10AP10 Gene

Proteins for RPL10AP10 Gene

Post-translational modifications for RPL10AP10 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPL10AP10 Gene

Domains & Families for RPL10AP10 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPL10AP10 Gene

Function for RPL10AP10 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPL10AP10 Gene

Localization for RPL10AP10 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPL10AP10 Gene

Pathways & Interactions for RPL10AP10 Gene

SuperPathways for RPL10AP10 Gene

No Data Available

Interacting Proteins for RPL10AP10 Gene

Gene Ontology (GO) - Biological Process for RPL10AP10 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPL10AP10 Gene

Transcripts for RPL10AP10 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for RPL10AP10 Gene

No ASD Table

Relevant External Links for RPL10AP10 Gene

GeneLoc Exon Structure for
RPL10AP10
ECgene alternative splicing isoforms for
RPL10AP10

No data available for mRNA/cDNA for RPL10AP10 Gene

Expression for RPL10AP10 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPL10AP10 Gene:

RPL10AP10
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RPL10AP10 Gene

Orthologs for RPL10AP10 Gene

No data available for Orthologs and Evolution for RPL10AP10 Gene

Paralogs for RPL10AP10 Gene

No data available for Paralogs for RPL10AP10 Gene

Variants for RPL10AP10 Gene

Relevant External Links for RPL10AP10 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPL10AP10

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPL10AP10 Gene

Disorders for RPL10AP10 Gene

Relevant External Links for RPL10AP10

Genetic Association Database (GAD)
RPL10AP10
Human Genome Epidemiology (HuGE) Navigator
RPL10AP10

No disorders were found for RPL10AP10 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPL10AP10 Gene

Publications for RPL10AP10 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S. … Gerstein M. (Genome Biol. 2009) 2 3 64
  2. Integrated genomic analysis implicates haploinsufficiency of multiple chromosome 5q31.2 genes in de novo myelodysplastic syndromes pathogenesis. (PMID: 19240791) Graubert T.A. … Walter M.J. (PLoS ONE 2009) 3 46 64

Products for RPL10AP10 Gene

Sources for RPL10AP10 Gene

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