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Aliases for RPF2P1 Gene

Aliases for RPF2P1 Gene

  • Ribosome Production Factor 2 Homolog Pseudogene 1 2 3 5
  • Ribosome Production Factor 2 Pseudogene 2 3
  • Brix Domain Containing 1 Pseudogene 2 3
  • Ribosome Production Factor 2 Homolog (S. Cerevisiae) Pseudogene 1 2
  • Chromosome 20 Open Reading Frame 53 2
  • BA353C18.4 3
  • C20orf53 3
  • BXDC1P 3
  • RPF2P 3

External Ids for RPF2P1 Gene

Previous HGNC Symbols for RPF2P1 Gene

  • C20orf53
  • BXDC1P
  • RPF2P

Previous GeneCards Identifiers for RPF2P1 Gene

  • GC20P034342

Summaries for RPF2P1 Gene

GeneCards Summary for RPF2P1 Gene

RPF2P1 (Ribosome Production Factor 2 Homolog Pseudogene 1) is a Pseudogene.

Additional gene information for RPF2P1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPF2P1 Gene

Genomics for RPF2P1 Gene

GeneHancer (GH) Regulatory Elements for RPF2P1 Gene

Promoters and enhancers for RPF2P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH20I035791 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 12.6 +39.6 39617 1.7 SOX6 ATM JUND GATA3 ZNF366 POLR2A RCOR2 ADNP IKZF1 ESR1 CPNE1 PHF20 RBM39 RPF2P1 NFS1 ROMO1 SPAG4 GC20M035824
GH20I035776 Enhancer 1.2 Ensembl ENCODE dbSUPER 12.1 +24.3 24296 1.6 HDAC1 PKNOX1 CLOCK SMAD1 NFIB ZNF133 SIN3A SCRT2 RCOR1 ZNF362 CPNE1 RPF2P1 RBM39 NFS1 ROMO1 PHF20 GC20M035824
GH20I035854 Enhancer 0.7 ENCODE dbSUPER 12.3 +102.1 102079 0.2 FOXA2 HLF CEBPA CEBPG EP300 ENSG00000199676 GC20M035854 CPNE1 PHF20 RPF2P1 RBM39 RNU4-40P RNU6-937P NFS1 ROMO1
GH20I035849 Enhancer 0.7 ENCODE dbSUPER 12.3 +97.0 96983 0.9 STAT1 ZNF362 RAD21 ZBTB17 GC20M035851 COX7BP2 CPNE1 PHF20 RPF2P1 RBM39 RNU4-40P RNU6-937P GC20M035824
GH20I035729 Enhancer 0.6 dbSUPER 12.6 -22.2 -22200 3 PAF1 ZNF362 FOXA2 ZBTB6 MXD4 FOXA1 POLR2B NONO POLR2A MLLT1 CPNE1 RBM39 RBM12 TRPC4AP RPL36P4 RPF2P1 AAR2 PHF20 ROMO1 NFS1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPF2P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPF2P1 Gene

Genomic Locations for RPF2P1 Gene
chr20:35,752,795-35,753,737
(GRCh38/hg38)
Size:
943 bases
Orientation:
Plus strand
chr20:34,340,717-34,341,659
(GRCh37/hg19)

Genomic View for RPF2P1 Gene

Genes around RPF2P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPF2P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPF2P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPF2P1 Gene

Proteins for RPF2P1 Gene

Post-translational modifications for RPF2P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPF2P1 Gene

Domains & Families for RPF2P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPF2P1 Gene

Function for RPF2P1 Gene

Phenotypes From GWAS Catalog for RPF2P1 Gene

Phenotypes for RPF2P1 Gene

genes like me logo Genes that share phenotypes with RPF2P1: view

Animal Model Products

Inhibitory RNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPF2P1 Gene

Localization for RPF2P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPF2P1 Gene

Pathways & Interactions for RPF2P1 Gene

SuperPathways for RPF2P1 Gene

No Data Available

Interacting Proteins for RPF2P1 Gene

Gene Ontology (GO) - Biological Process for RPF2P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPF2P1 Gene

Drugs & Compounds for RPF2P1 Gene

No Compound Related Data Available

Transcripts for RPF2P1 Gene

mRNA/cDNA for RPF2P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Inhibitory RNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPF2P1 Gene

No ASD Table

Relevant External Links for RPF2P1 Gene

GeneLoc Exon Structure for
RPF2P1
ECgene alternative splicing isoforms for
RPF2P1

Expression for RPF2P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPF2P1 Gene

mRNA differential expression in normal tissues according to GTEx for RPF2P1 Gene

This gene is overexpressed in Testis (x8.9).

NURSA nuclear receptor signaling pathways regulating expression of RPF2P1 Gene:

RPF2P1
genes like me logo Genes that share expression patterns with RPF2P1: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPF2P1 Gene

Orthologs for RPF2P1 Gene

Evolution for RPF2P1 Gene

ENSEMBL:
Gene Tree for RPF2P1 (if available)
TreeFam:
Gene Tree for RPF2P1 (if available)

No data available for Orthologs for RPF2P1 Gene

Paralogs for RPF2P1 Gene

No data available for Paralogs for RPF2P1 Gene

Variants for RPF2P1 Gene

Additional Variant Information for RPF2P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPF2P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPF2P1 Gene

Disorders for RPF2P1 Gene

No disorders were found for RPF2P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPF2P1 Gene

Publications for RPF2P1 Gene

  1. The DNA sequence and comparative analysis of human chromosome 20. (PMID: 11780052) Deloukas P … Rogers J (Nature 2001) 3 58

Products for RPF2P1 Gene

Sources for RPF2P1 Gene

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