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Aliases for RPF2P1 Gene

Aliases for RPF2P1 Gene

  • Ribosome Production Factor 2 Homolog Pseudogene 1 2 3 5
  • Ribosome Production Factor 2 Pseudogene 2 3
  • Brix Domain Containing 1 Pseudogene 2 3
  • Ribosome Production Factor 2 Homolog (S. Cerevisiae) Pseudogene 1 2
  • Chromosome 20 Open Reading Frame 53 2
  • BA353C18.4 3
  • C20orf53 3
  • BXDC1P 3
  • RPF2P 3

External Ids for RPF2P1 Gene

Previous HGNC Symbols for RPF2P1 Gene

  • C20orf53
  • BXDC1P
  • RPF2P

Previous GeneCards Identifiers for RPF2P1 Gene

  • GC20P034342

Summaries for RPF2P1 Gene

GeneCards Summary for RPF2P1 Gene

RPF2P1 (Ribosome Production Factor 2 Homolog Pseudogene 1) is a Pseudogene.

Additional gene information for RPF2P1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPF2P1 Gene

Genomics for RPF2P1 Gene

Regulatory Elements for RPF2P1 Gene

Enhancers for RPF2P1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH20H035765 1.8 FANTOM5 ENCODE dbSUPER 14.9 +16.8 16751 9 MLX FEZF1 DMAP1 YY1 SLC30A9 ZNF416 ZNF548 SP3 NFYC SSRP1 CPNE1 RBM12 RBM39 NCOA6 ERGIC3 PHF20 AAR2 DLGAP4-AS1 TRPC4AP PROCR
GH20H036091 1.6 FANTOM5 ENCODE dbSUPER 14.6 +340.3 340294 3 ZNF133 SIN3A ZNF2 ZNF766 GLIS2 GATA2 ELK1 KLF7 YY2 ZNF488 DSN1 ERGIC3 EPB41L1 HMGB3P2 RPF2P1 C20orf173 ENSG00000242507 DLGAP4-AS1 CNBD2 LOC102725201
GH20H035615 1.4 ENCODE dbSUPER 14.7 -135.0 -134968 4 MLX ZFP64 DMAP1 YBX1 YY1 SLC30A9 ZNF143 ZNF548 SP3 NFYC CPNE1 RBM12 RBM39 C20orf173 RPF2P1 HMGB3P2 ENSG00000242507 AAR2 PROCR GDF5
GH20H035791 1.5 FANTOM5 Ensembl ENCODE dbSUPER 12.6 +39.6 39618 1 SOX6 ATM GATA3 JUND ZNF366 POLR2A RCOR2 ADNP IKZF1 NBN CPNE1 PHF20 RBM39 RPF2P1 NFS1 ROMO1 SPAG4 GC20M035824
GH20H035776 1.3 Ensembl ENCODE dbSUPER 12.1 +24.3 24297 1 HDAC1 PKNOX1 NFIB ZNF133 SIN3A SCRT2 RCOR1 ZNF362 ZEB2 ZNF217 CPNE1 RPF2P1 RBM39 NFS1 ROMO1 PHF20 GC20M035824
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPF2P1 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPF2P1 Gene

Chromosome:
20
Start:
35,752,795 bp from pter
End:
35,753,737 bp from pter
Size:
943 bases
Orientation:
Plus strand

Genomic View for RPF2P1 Gene

Genes around RPF2P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPF2P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPF2P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPF2P1 Gene

Proteins for RPF2P1 Gene

Post-translational modifications for RPF2P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPF2P1 Gene

Domains & Families for RPF2P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPF2P1 Gene

Function for RPF2P1 Gene

Phenotypes From GWAS Catalog for RPF2P1 Gene

Phenotypes for RPF2P1 Gene

genes like me logo Genes that share phenotypes with RPF2P1: view

Animal Model Products

CRISPR Products

Inhibitory RNA Products

Clone Products

  • Applied Biological Materials Clones for RPF2P1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPF2P1 Gene

Localization for RPF2P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPF2P1 Gene

Pathways & Interactions for RPF2P1 Gene

SuperPathways for RPF2P1 Gene

No Data Available

Interacting Proteins for RPF2P1 Gene

Gene Ontology (GO) - Biological Process for RPF2P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPF2P1 Gene

Drugs & Compounds for RPF2P1 Gene

No Compound Related Data Available

Transcripts for RPF2P1 Gene

mRNA/cDNA for RPF2P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Inhibitory RNA Products

Clone Products

  • Applied Biological Materials Clones for RPF2P1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for RPF2P1 Gene

No ASD Table

Relevant External Links for RPF2P1 Gene

GeneLoc Exon Structure for
RPF2P1
ECgene alternative splicing isoforms for
RPF2P1

Expression for RPF2P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPF2P1 Gene

mRNA differential expression in normal tissues according to GTEx for RPF2P1 Gene

This gene is overexpressed in Testis (x8.9).

NURSA nuclear receptor signaling pathways regulating expression of RPF2P1 Gene:

RPF2P1
genes like me logo Genes that share expression patterns with RPF2P1: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPF2P1 Gene

Orthologs for RPF2P1 Gene

Evolution for RPF2P1 Gene

ENSEMBL:
Gene Tree for RPF2P1 (if available)
TreeFam:
Gene Tree for RPF2P1 (if available)

No data available for Orthologs for RPF2P1 Gene

Paralogs for RPF2P1 Gene

No data available for Paralogs for RPF2P1 Gene

Variants for RPF2P1 Gene

Relevant External Links for RPF2P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPF2P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPF2P1 Gene

Disorders for RPF2P1 Gene

No disorders were found for RPF2P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPF2P1 Gene

Publications for RPF2P1 Gene

  1. The DNA sequence and comparative analysis of human chromosome 20. (PMID: 11780052) Deloukas P … Rogers J (Nature 2001) 3 60

Products for RPF2P1 Gene

Sources for RPF2P1 Gene

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