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Aliases for RPEP6 Gene

Subcategory (RNA class) for RPEP6 Gene

lncRNA

Aliases for RPEP6 Gene

  • Ribulose-5-Phosphate-3-Epimerase Pseudogene 6 2 3 5

External Ids for RPEP6 Gene

ORGUL Members for RPEP6 Gene

Previous GeneCards Identifiers for RPEP6 Gene

  • GC11P071843

Summaries for RPEP6 Gene

GeneCards Summary for RPEP6 Gene

RPEP6 (Ribulose-5-Phosphate-3-Epimerase Pseudogene 6) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPEP6 Gene

Genomics for RPEP6 Gene

Regulatory Elements for RPEP6 Gene

Enhancers for RPEP6 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH11G072143 1.3 Ensembl ENCODE dbSUPER 0.4 +13.4 13427 2.8 RB1 RAD21 RFX5 SCRT2 ZNF143 FOS CREM ZNF654 CEBPB REST FOLR3 ANAPC15 LAMTOR1 LRTOMT NUMA1 LOC100128494 PHOX2A RNF121 IL18BP FAM86C1
GH11G072139 1.1 Ensembl ENCODE dbSUPER 0.4 +10.1 10060 2.9 FOSL1 GTF3C2 JUND JUN BHLHE40 MAX FOS FOLR3 LOC100128494 LAMTOR1 LOC100133315 ZNF705E ANAPC15 LRTOMT OR7E128P NADSYN1 IL18BP
GH11G072115 0.9 ENCODE dbSUPER 0.4 -15.4 -15373 0.8 ZNF740 MAFG BACH1 ZNF592 CREB3 ZFP3 ZNF585B NFE2 CUX1 EMSY LRTOMT NUMA1 FAM86C1 GC11P072115 RPEP6
GH11G072132 0.5 Ensembl 0.7 +1.6 1619 1.0 ZNF316 ZNF512 MAFG ZBTB33 EMSY LRTOMT ANAPC15 LAMTOR1 ENSG00000256403 FOLR3 FAM86C1 RPEP6 GC11P072156
GH11G072118 0.8 ENCODE 0.4 -12.6 -12553 0.2 PKNOX1 ATF1 ZSCAN4 CDC5L FOSL1 GATA2 NCOR1 NR2F6 CREM RFX1 GC11P072115 RPEP6
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RPEP6 on UCSC Golden Path with GeneCards custom track

Genomic Location for RPEP6 Gene

Chromosome:
11
Start:
72,131,282 bp from pter
End:
72,131,909 bp from pter
Size:
628 bases
Orientation:
Plus strand

Genomic View for RPEP6 Gene

Genes around RPEP6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPEP6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPEP6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPEP6 Gene

Proteins for RPEP6 Gene

Post-translational modifications for RPEP6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPEP6 Gene

Domains & Families for RPEP6 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPEP6 Gene

Function for RPEP6 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPEP6 Gene

Localization for RPEP6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RPEP6 Gene

Pathways & Interactions for RPEP6 Gene

SuperPathways for RPEP6 Gene

No Data Available

Interacting Proteins for RPEP6 Gene

Gene Ontology (GO) - Biological Process for RPEP6 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPEP6 Gene

Transcripts for RPEP6 Gene

mRNA/cDNA for RPEP6 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPEP6 Gene

No ASD Table

Relevant External Links for RPEP6 Gene

GeneLoc Exon Structure for
RPEP6
ECgene alternative splicing isoforms for
RPEP6

Expression for RPEP6 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPEP6 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPEP6 Gene:

RPEP6
genes like me logo Genes that share expression patterns with RPEP6: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPEP6 Gene

Orthologs for RPEP6 Gene

Evolution for RPEP6 Gene

ENSEMBL:
Gene Tree for RPEP6 (if available)
TreeFam:
Gene Tree for RPEP6 (if available)

No data available for Orthologs for RPEP6 Gene

Paralogs for RPEP6 Gene

No data available for Paralogs for RPEP6 Gene

Variants for RPEP6 Gene

Relevant External Links for RPEP6 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPEP6

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPEP6 Gene

Disorders for RPEP6 Gene

No disorders were found for RPEP6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPEP6 Gene

Publications for RPEP6 Gene

No publications were found for RPEP6 Gene.

Products for RPEP6 Gene

Sources for RPEP6 Gene

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