Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RP9P Gene

Aliases for RP9P Gene

  • Retinitis Pigmentosa 9 Pseudogene 2 3 5
  • PNAS-13 3

External Ids for RP9P Gene

Summaries for RP9P Gene

GeneCards Summary for RP9P Gene

RP9P (Retinitis Pigmentosa 9 Pseudogene) is a Pseudogene. Diseases associated with RP9P include retinitis pigmentosa 9 and retinitis pigmentosa.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RP9P Gene

Genomics for RP9P Gene

Regulatory Elements for RP9P Gene

Promoters for RP9P Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around RP9P on UCSC Golden Path with GeneCards custom track

Genomic Location for RP9P Gene

Chromosome:
7
Start:
32,916,815 bp from pter
End:
32,943,176 bp from pter
Size:
26,362 bases
Orientation:
Minus strand

Genomic View for RP9P Gene

Genes around RP9P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RP9P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RP9P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RP9P Gene

Proteins for RP9P Gene

Post-translational modifications for RP9P Gene

No Post-translational modifications

No data available for DME Specific Peptides for RP9P Gene

Domains & Families for RP9P Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RP9P Gene

Function for RP9P Gene

miRNA for RP9P Gene

miRTarBase miRNAs that target RP9P

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for RP9P Gene

Localization for RP9P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RP9P Gene

Pathways & Interactions for RP9P Gene

SuperPathways for RP9P Gene

No Data Available

Interacting Proteins for RP9P Gene

Gene Ontology (GO) - Biological Process for RP9P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RP9P Gene

Drugs & Compounds for RP9P Gene

No Compound Related Data Available

Transcripts for RP9P Gene

mRNA/cDNA for RP9P Gene

(1) REFSEQ mRNAs :
(4) Additional mRNA sequences :
(210) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for RP9P Gene

Retinitis pigmentosa 9 pseudogene:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for RP9P Gene

No ASD Table

Relevant External Links for RP9P Gene

GeneLoc Exon Structure for
RP9P
ECgene alternative splicing isoforms for
RP9P

Expression for RP9P Gene

mRNA expression in normal human tissues for RP9P Gene

SOURCE GeneReport for Unigene cluster for RP9P Gene Hs.648086

genes like me logo Genes that share expression patterns with RP9P: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for RP9P Gene

Orthologs for RP9P Gene

Evolution for RP9P Gene

ENSEMBL:
Gene Tree for RP9P (if available)
TreeFam:
Gene Tree for RP9P (if available)

No data available for Orthologs for RP9P Gene

Paralogs for RP9P Gene

No data available for Paralogs for RP9P Gene

Variants for RP9P Gene

Sequence variations from dbSNP and Humsavar for RP9P Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type
rs2278818 -- 32,921,568(+) TGAAC(C/T)GTGTA intron-variant
rs2278819 -- 32,921,912(+) TACTT(A/G/T)CAGAA intron-variant
rs2278820 -- 32,922,041(+) GTCTT(C/T)ATGGA intron-variant
rs2893440 -- 32,921,411(+) TGACC(A/G)TACCA nc-transcript-variant
rs2893442 -- 32,923,378(+) GGAGT(A/T)TGAGA intron-variant

Structural Variations from Database of Genomic Variants (DGV) for RP9P Gene

Variant ID Type Subtype PubMed ID
dgv1127e201 CNV Deletion 23290073
nsv436907 CNV Insertion 17901297
esv2734229 CNV Deletion 23290073

Relevant External Links for RP9P Gene

HapMap Linkage Disequilibrium report
RP9P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for RP9P Gene

Disorders for RP9P Gene

MalaCards: The human disease database

(2) MalaCards diseases for RP9P Gene - From: GeneCards

Disorder Aliases PubMed IDs
retinitis pigmentosa 9
  • retinitis pigmentosa-9
retinitis pigmentosa
  • retinitis pigmentosa 1
- elite association - COSMIC cancer census association via MalaCards
Search RP9P in MalaCards View complete list of genes associated with diseases

Relevant External Links for RP9P

Genetic Association Database (GAD)
RP9P
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
RP9P
genes like me logo Genes that share disorders with RP9P: view

No data available for UniProtKB/Swiss-Prot and Genatlas for RP9P Gene

Publications for RP9P Gene

  1. A proteome-scale map of the human interactome network. (PMID: 25416956) Rolland T. … Vidal M. (Cell 2014) 3 67
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for RP9P Gene

Sources for RP9P Gene

Back to Top

Content