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Aliases for ROCK1P1 Gene

Aliases for ROCK1P1 Gene

  • Rho Associated Coiled-Coil Containing Protein Kinase 1 Pseudogene 1 2 3 5

External Ids for ROCK1P1 Gene

Summaries for ROCK1P1 Gene

GeneCards Summary for ROCK1P1 Gene

ROCK1P1 (Rho Associated Coiled-Coil Containing Protein Kinase 1 Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ROCK1P1 Gene

Genomics for ROCK1P1 Gene

Regulatory Elements for ROCK1P1 Gene

Enhancers for ROCK1P1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
- Elite enhancer/Elite enhancer-gene association

Enhancers around ROCK1P1 on UCSC Golden Path with GeneCards custom track

Genomic Location for ROCK1P1 Gene

Chromosome:
18
Start:
109,065 bp from pter
End:
122,219 bp from pter
Size:
13,155 bases
Orientation:
Plus strand

Genomic View for ROCK1P1 Gene

Genes around ROCK1P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ROCK1P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ROCK1P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ROCK1P1 Gene

Proteins for ROCK1P1 Gene

Post-translational modifications for ROCK1P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ROCK1P1 Gene

Domains & Families for ROCK1P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ROCK1P1 Gene

Function for ROCK1P1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ROCK1P1 Gene

Localization for ROCK1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ROCK1P1 Gene

Pathways & Interactions for ROCK1P1 Gene

SuperPathways for ROCK1P1 Gene

No Data Available

Interacting Proteins for ROCK1P1 Gene

Gene Ontology (GO) - Biological Process for ROCK1P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ROCK1P1 Gene

Drugs & Compounds for ROCK1P1 Gene

No Compound Related Data Available

Transcripts for ROCK1P1 Gene

mRNA/cDNA for ROCK1P1 Gene

(2) Additional mRNA sequences :
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for ROCK1P1 Gene

Rho-associated, coiled-coil containing protein kinase 1 pseudogene 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ROCK1P1 Gene

No ASD Table

Relevant External Links for ROCK1P1 Gene

GeneLoc Exon Structure for
ROCK1P1
ECgene alternative splicing isoforms for
ROCK1P1

Expression for ROCK1P1 Gene

mRNA expression in normal human tissues for ROCK1P1 Gene

mRNA differential expression in normal tissues according to GTEx for ROCK1P1 Gene

This gene is overexpressed in Testis (x15.8).

Protein differential expression in normal tissues from HIPED for ROCK1P1 Gene

This gene is overexpressed in Heart (69.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from MOPED for ROCK1P1 Gene



Protein tissue co-expression partners for ROCK1P1 Gene

- Elite partner

NURSA nuclear receptor signaling pathways regulating expression of ROCK1P1 Gene:

ROCK1P1

SOURCE GeneReport for Unigene cluster for ROCK1P1 Gene:

Hs.585843
genes like me logo Genes that share expression patterns with ROCK1P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery and mRNA Expression by UniProt/SwissProt for ROCK1P1 Gene

Orthologs for ROCK1P1 Gene

Evolution for ROCK1P1 Gene

ENSEMBL:
Gene Tree for ROCK1P1 (if available)
TreeFam:
Gene Tree for ROCK1P1 (if available)

No data available for Orthologs for ROCK1P1 Gene

Paralogs for ROCK1P1 Gene

No data available for Paralogs for ROCK1P1 Gene

Variants for ROCK1P1 Gene

Sequence variations from dbSNP and Humsavar for ROCK1P1 Gene

SNP ID Clin Chr 18 pos Sequence Context AA Info Type
rs2663689 -- 115,431(+) GAGGT(A/G)GTTGT intron-variant
rs2663690 -- 115,433(+) GGTAG(A/T)TGTTT intron-variant
rs2663691 -- 115,645(+) tccaa(A/C)catgg intron-variant
rs2847083 -- 122,474(-) GAAAG(A/G)TTGTC downstream-variant-500B
rs2847085 -- 122,328(-) AAATA(C/T)ACTTT downstream-variant-500B

Structural Variations from Database of Genomic Variants (DGV) for ROCK1P1 Gene

Variant ID Type Subtype PubMed ID
dgv1532n106 CNV deletion 24896259
dgv1533n106 CNV tandem duplication 24896259
dgv1837e59 CNV duplication 20981092
dgv3300n100 CNV gain 25217958
dgv3301n100 CNV gain 25217958
dgv5809n54 CNV gain 21841781
esv24223 CNV gain+loss 19812545
esv3353264 OTHER inversion 20981092
esv3362274 CNV insertion 20981092
esv3379966 CNV insertion 20981092
esv3423946 CNV duplication 20981092
esv3431303 OTHER inversion 20981092
esv3641470 CNV loss 21293372
esv3641471 CNV gain 21293372
esv3749 OTHER complex 18987735
esv3893054 CNV loss 25118596
esv5115 OTHER complex 18987735
esv6206 CNV gain 19470904
esv6651 CNV gain 19470904
esv6812 CNV loss 19470904
esv7134 CNV loss 19470904
esv7202 CNV loss 19470904
nsv1064150 CNV gain 25217958
nsv1070856 CNV deletion 25765185
nsv1070857 CNV deletion 25765185
nsv1077846 CNV duplication 25765185
nsv1116246 CNV deletion 24896259
nsv1133239 CNV tandem duplication 24896259
nsv1134687 CNV deletion 24896259
nsv1138590 CNV deletion 24896259
nsv1141313 CNV duplication 24896259
nsv482935 CNV loss 15286789
nsv576227 CNV gain 21841781
nsv576228 CNV loss 21841781
nsv576229 CNV gain 21841781
nsv576232 CNV loss 21841781
nsv576234 CNV gain 21841781
nsv821099 CNV duplication 20802225
nsv828155 CNV loss 20364138
nsv954980 CNV deletion 24416366
nsv960642 CNV duplication 23825009
nsv960643 CNV duplication 23825009
nsv978591 CNV duplication 23825009

Relevant External Links for ROCK1P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ROCK1P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for ROCK1P1 Gene

Disorders for ROCK1P1 Gene

Relevant External Links for ROCK1P1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ROCK1P1

No disorders were found for ROCK1P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ROCK1P1 Gene

Publications for ROCK1P1 Gene

  1. Genome-wide association study of chronic periodontitis in a general German population. (PMID: 24024966) Teumer A. … Kocher T. (J. Clin. Periodontol. 2013) 3 65
  2. Little ROCK is a ROCK1 pseudogene expressed in human smooth muscle cells. (PMID: 20398283) Montefusco M.C. … Huggins G.S. (BMC Genet. 2010) 3 65
  3. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3 65
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 65

Products for ROCK1P1 Gene

Sources for ROCK1P1 Gene

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