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Aliases for ROCK1P1 Gene

Aliases for ROCK1P1 Gene

  • Rho Associated Coiled-Coil Containing Protein Kinase 1 Pseudogene 1 2 3
  • Rho-Associated, Coiled-Coil Containing Protein Kinase 1 Pseudogene 1 5

External Ids for ROCK1P1 Gene

Summaries for ROCK1P1 Gene

GeneCards Summary for ROCK1P1 Gene

ROCK1P1 (Rho Associated Coiled-Coil Containing Protein Kinase 1 Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ROCK1P1 Gene

Genomics for ROCK1P1 Gene

Genomic Location for ROCK1P1 Gene

Chromosome:
18
Start:
109,065 bp from pter
End:
122,219 bp from pter
Size:
13,155 bases
Orientation:
Plus strand

Genomic View for ROCK1P1 Gene

Genes around ROCK1P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ROCK1P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ROCK1P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ROCK1P1 Gene

No data available for Regulatory Elements for ROCK1P1 Gene

Proteins for ROCK1P1 Gene

Post-translational modifications for ROCK1P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ROCK1P1 Gene

Domains & Families for ROCK1P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ROCK1P1 Gene

Function for ROCK1P1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ROCK1P1 Gene

Localization for ROCK1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ROCK1P1 Gene

Pathways & Interactions for ROCK1P1 Gene

SuperPathways for ROCK1P1 Gene

No Data Available

Interacting Proteins for ROCK1P1 Gene

Gene Ontology (GO) - Biological Process for ROCK1P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ROCK1P1 Gene

Drugs & Compounds for ROCK1P1 Gene

No Compound Related Data Available

Transcripts for ROCK1P1 Gene

mRNA/cDNA for ROCK1P1 Gene

(2) Additional mRNA sequences :
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for ROCK1P1 Gene

Rho-associated, coiled-coil containing protein kinase 1 pseudogene 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ROCK1P1 Gene

No ASD Table

Relevant External Links for ROCK1P1 Gene

GeneLoc Exon Structure for
ROCK1P1
ECgene alternative splicing isoforms for
ROCK1P1

Expression for ROCK1P1 Gene

mRNA expression in normal human tissues for ROCK1P1 Gene

mRNA differential expression in normal tissues according to GTEx for ROCK1P1 Gene

This gene is overexpressed in Testis (x15.8).

Protein differential expression in normal tissues from HIPED for ROCK1P1 Gene

This gene is overexpressed in Heart (69.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from for ROCK1P1 Gene



SOURCE GeneReport for Unigene cluster for ROCK1P1 Gene Hs.585843

genes like me logo Genes that share expression patterns with ROCK1P1: view

Protein tissue co-expression partners for ROCK1P1 Gene

- Elite partner

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery and mRNA Expression by UniProt/SwissProt for ROCK1P1 Gene

Orthologs for ROCK1P1 Gene

Evolution for ROCK1P1 Gene

ENSEMBL:
Gene Tree for ROCK1P1 (if available)
TreeFam:
Gene Tree for ROCK1P1 (if available)

No data available for Orthologs for ROCK1P1 Gene

Paralogs for ROCK1P1 Gene

No data available for Paralogs for ROCK1P1 Gene

Variants for ROCK1P1 Gene

Sequence variations from dbSNP and Humsavar for ROCK1P1 Gene

SNP ID Clin Chr 18 pos Sequence Context AA Info Type
rs14025 -- 120,722(-) CCACA(A/G)GGCAC nc-transcript-variant
rs2186883 -- 122,162(-) CATTA(C/G)TATAT nc-transcript-variant
rs2847083 -- 122,474(-) GAAAG(A/G)TTGTC downstream-variant-500B
rs2847085 -- 122,328(-) AAATA(C/T)ACTTT downstream-variant-500B
rs2847086 -- 122,127(-) CATAT(C/T)CATCA nc-transcript-variant

Structural Variations from Database of Genomic Variants (DGV) for ROCK1P1 Gene

Variant ID Type Subtype PubMed ID
nsv909285 CNV Gain 21882294
esv24223 CNV Gain+Loss 19812545
nsv909286 CNV Gain 21882294
nsv821099 CNV Duplication 20802225
esv3749 CNV Complex 18987735
esv5115 CNV Complex 18987735
esv7134 CNV Loss 19470904
esv6651 CNV Gain 19470904
esv6206 CNV Gain 19470904
esv7202 CNV Loss 19470904
nsv828155 CNV Loss 20364138

Relevant External Links for ROCK1P1 Gene

HapMap Linkage Disequilibrium report
ROCK1P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for ROCK1P1 Gene

Disorders for ROCK1P1 Gene

Relevant External Links for ROCK1P1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ROCK1P1

No disorders were found for ROCK1P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ROCK1P1 Gene

Publications for ROCK1P1 Gene

  1. Genome-wide association study of chronic periodontitis in a general German population. (PMID: 24024966) Teumer A. … Kocher T. (J. Clin. Periodontol. 2013) 3 67
  2. Little ROCK is a ROCK1 pseudogene expressed in human smooth muscle cells. (PMID: 20398283) Montefusco M.C. … Huggins G.S. (BMC Genet. 2010) 3
  3. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for ROCK1P1 Gene

Sources for ROCK1P1 Gene

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