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Aliases for ROCK1P1 Gene

Aliases for ROCK1P1 Gene

  • Rho-Associated, Coiled-Coil Containing Protein Kinase 1 Pseudogene 1 2 3

External Ids for ROCK1P1 Gene

Summaries for ROCK1P1 Gene

GeneCards Summary for ROCK1P1 Gene

ROCK1P1 (Rho-Associated, Coiled-Coil Containing Protein Kinase 1 Pseudogene 1) is a Pseudogene. Among its related pathways are Signaling by GPCR and L1CAM interactions.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ROCK1P1 Gene

Genomics for ROCK1P1 Gene

Genomic Location for ROCK1P1 Gene

Start:
109,065 bp from pter
End:
122,219 bp from pter
Size:
13,155 bases
Orientation:
Plus strand

Genomic View for ROCK1P1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ROCK1P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ROCK1P1 Gene

No data available for Regulatory Elements for ROCK1P1 Gene

Proteins for ROCK1P1 Gene

Post-translational modifications for ROCK1P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ROCK1P1 Gene

Domains for ROCK1P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ROCK1P1 Gene

Function for ROCK1P1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for ROCK1P1 Gene

Localization for ROCK1P1 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for ROCK1P1 Gene COMPARTMENTS Subcellular localization image for ROCK1P1 gene
Compartment Confidence
extracellular 3
cytoskeleton 2
cytosol 1
mitochondrion 1
nucleus 1
plasma membrane 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for ROCK1P1 Gene

Transcripts for ROCK1P1 Gene

mRNA/cDNA for ROCK1P1 Gene

(2) Additional mRNA sequences :
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for ROCK1P1 Gene

Rho-associated, coiled-coil containing protein kinase 1 pseudogene 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ROCK1P1 Gene

No ASD Table

Relevant External Links for ROCK1P1 Gene

GeneLoc Exon Structure for
ROCK1P1
ECgene alternative splicing isoforms for
ROCK1P1

Expression for ROCK1P1 Gene

mRNA expression in normal human tissues for ROCK1P1 Gene

mRNA differential expression in normal tissues according to GTEx for ROCK1P1 Gene

This gene is overexpressed in Testis (15.8).

Integrated Proteomics: protein expression from for ROCK1P1 Gene

SOURCE GeneReport for Unigene cluster for ROCK1P1 Gene Hs.585843

genes like me logo Genes that share expressions with ROCK1P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery and mRNA Expression by UniProt/SwissProt for ROCK1P1 Gene

Orthologs for ROCK1P1 Gene

Evolution for ROCK1P1 Gene

ENSEMBL:
Gene Tree for ROCK1P1 (if available)
TreeFam:
Gene Tree for ROCK1P1 (if available)

No data available for Orthologs for ROCK1P1 Gene

Paralogs for ROCK1P1 Gene

No data available for Paralogs for ROCK1P1 Gene

Variants for ROCK1P1 Gene

Sequence variations from dbSNP and Humsavar for ROCK1P1 Gene

SNP ID Clin Chr 18 pos Sequence Context AA Info Type MAF
rs14025 -- 120,722(-) CCACA(A/G)GGCAC nc-transcript-variant
rs2186883 -- 122,162(-) CATTA(C/G)TATAT nc-transcript-variant
rs2663689 -- 115,431(+) GAGGT(A/G)GTTGT intron-variant
rs2663690 -- 115,433(+) GGTAG(A/T)TGTTT intron-variant
rs2663691 -- 115,645(+) tccaa(A/C)catgg intron-variant

Structural Variations from Database of Genomic Variants (DGV) for ROCK1P1 Gene

Variant ID Type Subtype PubMed ID
nsv909285 CNV Gain 21882294
esv24223 CNV Gain+Loss 19812545
nsv909286 CNV Gain 21882294
nsv821099 CNV Duplication 20802225
esv3749 CNV Complex 18987735
esv5115 CNV Complex 18987735
esv7134 CNV Loss 19470904
esv6651 CNV Gain 19470904
esv6206 CNV Gain 19470904
esv7202 CNV Loss 19470904
nsv828155 CNV Loss 20364138

Relevant External Links for ROCK1P1 Gene

HapMap Linkage Disequilibrium report
ROCK1P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for ROCK1P1 Gene

Disorders for ROCK1P1 Gene

No disorders were found for ROCK1P1 Gene.

No data available for UniProtKB/Swiss-Prot for ROCK1P1 Gene

Publications for ROCK1P1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  2. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3
  3. Little ROCK is a ROCK1 pseudogene expressed in human smooth muscle cells. (PMID: 20398283) Montefusco M.C. … Huggins G.S. (BMC Genet. 2010) 3
  4. Genome-wide association study of chronic periodontitis in a general German population. (PMID: 24024966) Teumer A. … Kocher T. (J. Clin. Periodontol. 2013) 3

Products for ROCK1P1 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate ROCK1P1
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for ROCK1P1
    • Block miRNA regulation of ROCK1P1 using miScript Target Protectors

    Sources for ROCK1P1 Gene

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