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Aliases for RNY5 Gene

Subcategory (RNA class) for RNY5 Gene


Quality Score for this RNA gene is


Aliases for RNY5 Gene

  • RNA, Ro-Associated Y5 2 3
  • RNA, Y5 Small Cytoplasmic (Associated With Ro Protein) 2 3
  • Y5 3 6

External Ids for RNY5 Gene

ORGUL Members for RNY5 Gene

Previous GeneCards Identifiers for RNY5 Gene

  • GC07U990085
  • GC07P148029
  • GC07P148075
  • GC07P148269
  • GC07P148639
  • GC12M045570
  • GC12M045572

Summaries for RNY5 Gene

GeneCards Summary for RNY5 Gene

RNY5 (RNA, Ro-Associated Y5) is an RNA Gene, and is affiliated with the Y RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNY5 Gene

Genomics for RNY5 Gene

Regulatory Elements for RNY5 Gene

Genomic Location for RNY5 Gene

148,941,488 bp from pter
148,941,571 bp from pter
84 bases
Plus strand

Genomic View for RNY5 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for RNY5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNY5 Gene

Proteins for RNY5 Gene

Post-translational modifications for RNY5 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNY5 Gene

Domains for RNY5 Gene

Gene Families for RNY5 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with RNY5: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNY5 Gene

Function for RNY5 Gene

Molecular function for RNY5 Gene

GENATLAS Biochemistry:
small cytoplasmic ribonucleoprotein RY5,component of Ro ribunocleoprotein

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for RNY5 Gene

Localization for RNY5 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RNY5 Gene

Pathways for RNY5 Gene

SuperPathways for RNY5 Gene

No Data Available

Interacting Proteins for RNY5 Gene

Gene Ontology (GO) - Biological Process for RNY5 Gene


No data available for Pathways by source for RNY5 Gene

Compounds for RNY5 Gene

(6) Novoseek inferred chemical compound relationships for RNY5 Gene

Compound -log(P) Hits PubMed IDs
bibp3226 78.2 1
matrigel 26.2 1
lithium 15.8 2
sodium 0 2
calcium 0 1
genes like me logo Genes that share compounds with RNY5: view

Transcripts for RNY5 Gene

mRNA/cDNA for RNY5 Gene

(1) Selected AceView cDNA sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for RNY5 Gene

No ASD Table

Relevant External Links for RNY5 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for RNY5 Gene

mRNA expression in normal human tissues for RNY5 Gene

genes like me logo Genes that share expressions with RNY5: view

Primer Products

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Expression partners for RNY5 Gene

Orthologs for RNY5 Gene

No data available for Orthologs and Evolution for RNY5 Gene

Paralogs for RNY5 Gene

No data available for Paralogs for RNY5 Gene

Variants for RNY5 Gene

Sequence variations from dbSNP and Humsavar for RNY5 Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type MAF
rs822532 -- 148,941,131(+) GGCCC(A/G)GCCCT upstream-variant-2KB
rs822533 -- 148,939,758(-) TAGAA(C/T)TGATA upstream-variant-2KB
rs2035216 -- 148,941,480(-) GTTAT(C/T)CTGTG upstream-variant-2KB
rs2037628 -- 148,941,867(+) GGTTA(A/C)TTTTC downstream-variant-500B
rs4302762 -- 148,941,348(+) CATTT(G/T)GTTTT upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for RNY5 Gene

Variant ID Type Subtype PubMed ID
nsv689 CNV Insertion 18451855

Relevant External Links for RNY5 Gene

HapMap Linkage Disequilibrium report

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for RNY5 Gene

Disorders for RNY5 Gene

(1) Novoseek inferred disease relationships for RNY5 Gene

Disease -log(P) Hits PubMed IDs
obesity 27.4 1
genes like me logo Genes that share disorders with RNY5: view

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Genatlas and External Links for RNY5 Gene

Publications for RNY5 Gene

  1. Gene encoding human Ro-associated autoantigen Y5 RNA. (PMID: 8836182) Maraia R. … Green E.D. (Nucleic Acids Res. 1996) 3 23
  2. Human Y5 RNA specializes a Ro ribonucleoprotein for 5S ribosomal RNA quality control. (PMID: 18056422) Hogg J.R. … Collins K. (Genes Dev. 2007) 3 23
  3. The human Y4 small cytoplasmic RNA gene is controlled by upstream elements and resides on chromosome 7 with all other hY scRNA genes. (PMID: 7520568) Maraia R.J. … Darlington G.J. (Nucleic Acids Res. 1994) 2 3
  4. Identification of a novel hypothalamic neuropeptide Y receptor associated with feeding behavior. (PMID: 8824284) Hu Y. … McCaleb M.L. (J. Biol. Chem. 1996) 23
  5. Different thermodynamic binding mechanisms and peptide fine specificities associated with a panel of structurally similar high- affinity T cell receptors. (PMID: 18973345) Jones L.L. … Kranz D.M. (Biochemistry 2008) 23

Products for RNY5 Gene

Sources for RNY5 Gene

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