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Aliases for RNY5 Gene

Subcategory (RNA class) for RNY5 Gene

Y RNA

Quality Score for this RNA gene is

2

Aliases for RNY5 Gene

  • RNA, Ro-Associated Y5 2 3
  • RNA, Y5 Small Cytoplasmic (Associated With Ro Protein) 2 3
  • Y5 3

External Ids for RNY5 Gene

ORGUL Members for RNY5 Gene

Previous GeneCards Identifiers for RNY5 Gene

  • GC07U990085
  • GC07P148029
  • GC07P148075
  • GC07P148269
  • GC07P148639
  • GC12M045570
  • GC12M045572

Summaries for RNY5 Gene

GeneCards Summary for RNY5 Gene

RNY5 (RNA, Ro-Associated Y5) is an RNA Gene, and is affiliated with the Y RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNY5 Gene

Genomics for RNY5 Gene

Regulatory Elements for RNY5 Gene

Enhancers for RNY5 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around RNY5 on UCSC Golden Path with GeneCards custom track

Genomic Location for RNY5 Gene

Chromosome:
7
Start:
148,941,488 bp from pter
End:
148,941,571 bp from pter
Size:
84 bases
Orientation:
Plus strand

Genomic View for RNY5 Gene

Genes around RNY5 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNY5 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNY5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNY5 Gene

Proteins for RNY5 Gene

Post-translational modifications for RNY5 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNY5 Gene

Domains & Families for RNY5 Gene

Gene Families for RNY5 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with RNY5: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNY5 Gene

Function for RNY5 Gene

Molecular function for RNY5 Gene

GENATLAS Biochemistry:
small cytoplasmic ribonucleoprotein RY5,component of Ro ribunocleoprotein

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNY5 Gene

Localization for RNY5 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RNY5 Gene

Pathways & Interactions for RNY5 Gene

SuperPathways for RNY5 Gene

No Data Available

Interacting Proteins for RNY5 Gene

Gene Ontology (GO) - Biological Process for RNY5 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNY5 Gene

Drugs & Compounds for RNY5 Gene

(4) Drugs for RNY5 Gene - From: Novoseek

Name Status Disease Links Group Role Mechanism of Action Clinical Trials

(2) Additional Compounds for RNY5 Gene - From: Novoseek

Name Synonyms Role CAS Number PubChem IDs PubMed IDs
genes like me logo Genes that share compounds with RNY5: view

Expression for RNY5 Gene

mRNA expression in normal human tissues for RNY5 Gene

genes like me logo Genes that share expression patterns with RNY5: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for RNY5 Gene

Orthologs for RNY5 Gene

No data available for Orthologs and Evolution for RNY5 Gene

Paralogs for RNY5 Gene

No data available for Paralogs for RNY5 Gene

Variants for RNY5 Gene

Sequence variations from dbSNP and Humsavar for RNY5 Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type
rs822532 -- 148,941,131(+) GGCCC(A/G)GCCCT upstream-variant-2KB
rs822533 -- 148,939,758(-) TAGAA(C/T)TGATA upstream-variant-2KB
rs12667281 -- 148,940,673(+) GCTCA(C/T)GGTGG upstream-variant-2KB
rs2035216 -- 148,941,480(-) GTTAT(C/T)CTGTG upstream-variant-2KB
rs2037628 -- 148,941,867(+) GGTTA(A/C)TTTTC downstream-variant-500B

Structural Variations from Database of Genomic Variants (DGV) for RNY5 Gene

Variant ID Type Subtype PubMed ID
nsv689 CNV Insertion 18451855

Relevant External Links for RNY5 Gene

HapMap Linkage Disequilibrium report
RNY5

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for RNY5 Gene

Disorders for RNY5 Gene

Relevant External Links for RNY5

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
RNY5

No disorders were found for RNY5 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RNY5 Gene

Publications for RNY5 Gene

  1. The human Y4 small cytoplasmic RNA gene is controlled by upstream elements and resides on chromosome 7 with all other hY scRNA genes. (PMID: 7520568) Maraia R.J. … Darlington G.J. (Nucleic Acids Res. 1994) 2 3 67
  2. Human Y5 RNA specializes a Ro ribonucleoprotein for 5S ribosomal RNA quality control. (PMID: 18056422) Hogg J.R. … Collins K. (Genes Dev. 2007) 3 23
  3. Gene encoding human Ro-associated autoantigen Y5 RNA. (PMID: 8836182) Maraia R. … Green E.D. (Nucleic Acids Res. 1996) 3 23
  4. DPP-IV inhibition enhances the antilipolytic action of NPY in human adipose tissue. (PMID: 19175376) Kos K. … McTernan P.G. (Diabetes Obes Metab 2009) 23
  5. Neuropeptide Y induces gonadotropin-releasing hormone gene expression directly and through conditioned medium from mHypoE-38 NPY neurons. (PMID: 19371763) Dhillon S.S. … Belsham D.D. (Regul. Pept. 2009) 23

Products for RNY5 Gene

Sources for RNY5 Gene

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