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Aliases for RNY4P7 Gene

Subcategory (RNA class) for RNY4P7 Gene

Y RNA

Aliases for RNY4P7 Gene

  • RNA, Ro-Associated Y4 Pseudogene 7 2 3 5

External Ids for RNY4P7 Gene

ORGUL Members for RNY4P7 Gene

Previous GeneCards Identifiers for RNY4P7 Gene

  • GC02U901436
  • GC02M128559
  • GC02M120862

Summaries for RNY4P7 Gene

GeneCards Summary for RNY4P7 Gene

RNY4P7 (RNA, Ro-Associated Y4 Pseudogene 7) is a Pseudogene, and is affiliated with the Y RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNY4P7 Gene

Genomics for RNY4P7 Gene

Regulatory Elements for RNY4P7 Gene

Enhancers for RNY4P7 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02F127794 0.6 Ensembl 0.8 +3.0 2998 4.0 MTA2 IKZF1 NBN JUNB MNT SPI1 GC02M127799 RNY4P7 PIR38298
GH02F127809 1.1 ENCODE 0.4 -12.0 -11978 2.6 HDGF PKNOX1 MLX ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 ZNF143 WDR33 ERCC3 AMMECR1L GPR17 ENSG00000272789 GC02M127799 RNY4P7
GH02F127770 1.1 Ensembl ENCODE 0.3 +27.3 27318 2.0 ATF1 ZFP64 ZNF138 ZNF354C KLF7 FOS ZNF202 ZNF654 OVOL3 CEBPB AMMECR1L ERCC3 WDR33 LOC105373607 ENSG00000260634 POLR2D PIR38298 RNY4P7 GC02M127799
GH02F127799 0.4 Ensembl 0.8 -0.7 -703 0.6 RAD51 RNU6-395P RPS26P19 LIMS2 GC02M127799 RNY4P7 WDR33
GH02F127763 0.7 ENCODE 0.3 +35.0 34957 0.2 SOX13 GATAD2A SOX5 TFAP4 SAP130 TEAD1 FOXA3 ARID4B HMG20A HNF4A WDR33 LIMS2 GPR17 PIR38298 GC02M127799 RNY4P7
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RNY4P7 on UCSC Golden Path with GeneCards custom track

Genomic Location for RNY4P7 Gene

Chromosome:
2
Start:
127,798,903 bp from pter
End:
127,798,998 bp from pter
Size:
96 bases
Orientation:
Minus strand

Genomic View for RNY4P7 Gene

Genes around RNY4P7 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNY4P7 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNY4P7 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNY4P7 Gene

Proteins for RNY4P7 Gene

Post-translational modifications for RNY4P7 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNY4P7 Gene

Domains & Families for RNY4P7 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNY4P7 Gene

Function for RNY4P7 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNY4P7 Gene

Localization for RNY4P7 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RNY4P7 Gene

Pathways & Interactions for RNY4P7 Gene

SuperPathways for RNY4P7 Gene

No Data Available

Interacting Proteins for RNY4P7 Gene

Gene Ontology (GO) - Biological Process for RNY4P7 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNY4P7 Gene

Transcripts for RNY4P7 Gene

mRNA/cDNA for RNY4P7 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNY4P7 Gene

No ASD Table

Relevant External Links for RNY4P7 Gene

GeneLoc Exon Structure for
RNY4P7
ECgene alternative splicing isoforms for
RNY4P7

Expression for RNY4P7 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RNY4P7 Gene

NURSA nuclear receptor signaling pathways regulating expression of RNY4P7 Gene:

RNY4P7
genes like me logo Genes that share expression patterns with RNY4P7: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for RNY4P7 Gene

Orthologs for RNY4P7 Gene

This gene was present in the common ancestor of mammals.

Orthologs for RNY4P7 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia Y_RNA 35
  • 98 (a)
OneToOne
cow
(Bos Taurus)
Mammalia Y_RNA 35
  • 95 (a)
OneToMany
Species where no ortholog for RNY4P7 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RNY4P7 Gene

ENSEMBL:
Gene Tree for RNY4P7 (if available)
TreeFam:
Gene Tree for RNY4P7 (if available)

Paralogs for RNY4P7 Gene

No data available for Paralogs for RNY4P7 Gene

Variants for RNY4P7 Gene

Relevant External Links for RNY4P7 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNY4P7

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNY4P7 Gene

Disorders for RNY4P7 Gene

No disorders were found for RNY4P7 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNY4P7 Gene

Publications for RNY4P7 Gene

No publications were found for RNY4P7 Gene.

Products for RNY4P7 Gene

Sources for RNY4P7 Gene

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