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Aliases for RNY4P18 Gene

Subcategory (RNA class) for RNY4P18 Gene

Y RNA

Aliases for RNY4P18 Gene

  • RNA, Ro-Associated Y4 Pseudogene 18 2 3 5

External Ids for RNY4P18 Gene

ORGUL Members for RNY4P18 Gene

Previous GeneCards Identifiers for RNY4P18 Gene

  • GC00U922407
  • GC09U901479
  • GC09M113860

Summaries for RNY4P18 Gene

GeneCards Summary for RNY4P18 Gene

RNY4P18 (RNA, Ro-Associated Y4 Pseudogene 18) is a Pseudogene, and is affiliated with the Y RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNY4P18 Gene

Genomics for RNY4P18 Gene

Regulatory Elements for RNY4P18 Gene

Enhancers for RNY4P18 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09G111094 1 Ensembl ENCODE 0.7 +2.5 2533 1.5 PKNOX1 ZNF146 EED FOS PRDM10 RELB IKZF2 MAFK NFE2L2 MTA2 LPAR1 RNY4P18 GC09M111098
GH09G111099 0.9 ENCODE 0.7 -2.2 -2196 1.1 PKNOX1 FEZF1 ZNF2 GLIS2 ZNF263 SP3 TSHZ1 ZNF488 ZNF623 ZNF610 LPAR1 RNY4P18 GC09M111098 MIR7702
GH09G111078 1.3 FANTOM5 Ensembl ENCODE 0.4 +18.8 18813 0.4 PKNOX1 TBL1XR1 BMI1 RELA EED ZSCAN29 ETV6 RELB IKZF2 MTA2 LPAR1 KIAA0368 RNY4P18 GC09M111098
GH09G111065 1.2 FANTOM5 Ensembl ENCODE 0.3 +29.8 29807 3.7 MTA2 IKZF1 TRIM22 GATAD2B FOS DPF2 IKZF2 EP300 LPAR1 ZNF483 RNY4P18 GC09M111098
GH09G111160 1.3 VISTA Ensembl ENCODE 0.2 -65.8 -65761 5.2 JUND MNT FOS MAFK SP7 ZNF558 LPAR1 RNY4P18 GC09M111098 MIR7702
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RNY4P18 on UCSC Golden Path with GeneCards custom track

Genomic Location for RNY4P18 Gene

Chromosome:
9
Start:
111,097,325 bp from pter
End:
111,097,413 bp from pter
Size:
89 bases
Orientation:
Minus strand

Genomic View for RNY4P18 Gene

Genes around RNY4P18 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNY4P18 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNY4P18 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RNY4P18 Gene

Proteins for RNY4P18 Gene

Post-translational modifications for RNY4P18 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNY4P18 Gene

Domains & Families for RNY4P18 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNY4P18 Gene

Function for RNY4P18 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNY4P18 Gene

Localization for RNY4P18 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RNY4P18 Gene

Pathways & Interactions for RNY4P18 Gene

SuperPathways for RNY4P18 Gene

No Data Available

Interacting Proteins for RNY4P18 Gene

Gene Ontology (GO) - Biological Process for RNY4P18 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNY4P18 Gene

Drugs & Compounds for RNY4P18 Gene

No Compound Related Data Available

Transcripts for RNY4P18 Gene

mRNA/cDNA for RNY4P18 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNY4P18 Gene

No ASD Table

Relevant External Links for RNY4P18 Gene

GeneLoc Exon Structure for
RNY4P18
ECgene alternative splicing isoforms for
RNY4P18

Expression for RNY4P18 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RNY4P18 Gene

NURSA nuclear receptor signaling pathways regulating expression of RNY4P18 Gene:

RNY4P18
genes like me logo Genes that share expression patterns with RNY4P18: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNY4P18 Gene

Orthologs for RNY4P18 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for RNY4P18 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia Y_RNA 35
  • 99 (a)
OneToOne
Species where no ortholog for RNY4P18 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RNY4P18 Gene

ENSEMBL:
Gene Tree for RNY4P18 (if available)
TreeFam:
Gene Tree for RNY4P18 (if available)

Paralogs for RNY4P18 Gene

No data available for Paralogs for RNY4P18 Gene

Variants for RNY4P18 Gene

Relevant External Links for RNY4P18 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNY4P18

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNY4P18 Gene

Disorders for RNY4P18 Gene

No disorders were found for RNY4P18 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNY4P18 Gene

Publications for RNY4P18 Gene

No publications were found for RNY4P18 Gene.

Products for RNY4P18 Gene

Sources for RNY4P18 Gene

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