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Aliases for RNY4P10 Gene

Subcategory (RNA class) for RNY4P10 Gene

Y RNA

Aliases for RNY4P10 Gene

  • RNA, Ro-Associated Y4 Pseudogene 10 2 3 5

External Ids for RNY4P10 Gene

ORGUL Members for RNY4P10 Gene

Previous GeneCards Identifiers for RNY4P10 Gene

  • GC00U922736
  • GC06U901738
  • GC06P032909

Summaries for RNY4P10 Gene

GeneCards Summary for RNY4P10 Gene

RNY4P10 (RNA, Ro-Associated Y4 Pseudogene 10) is a Pseudogene, and is affiliated with the Y RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RNY4P10 Gene

Genomics for RNY4P10 Gene

Regulatory Elements for RNY4P10 Gene

Enhancers for RNY4P10 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06G033016 1.9 FANTOM5 Ensembl ENCODE dbSUPER 10.7 -180.7 -180734 5.0 PKNOX1 ZNF493 ARID4B SIN3A ZNF2 YY1 ZNF121 GLIS2 ZNF143 KLF7 HCG25 HLA-DQA2 PPT2 HLA-DPB1 HLA-DPA1 RXRB HLA-DQB2 HLA-DMA COL11A2 BRD2
GH06G033061 1.5 FANTOM5 ENCODE dbSUPER 11.1 -137.4 -137427 0.7 HDGF TBP FOXA2 ATF1 ELK1 CBX5 ZNF143 ZNF207 RELB IKZF2 HLA-DPA1 HLA-DQB1 TAP1 PSMB9 RNY4P10 RXRB SLC39A7 HSD17B8 MIR219A1 HLA-DPB1
GH06G032984 1.5 Ensembl ENCODE dbSUPER 10.2 -214.7 -214714 1.3 HDGF PKNOX1 ATF1 ARID4B SIN3A ZNF2 SLC30A9 GLIS2 ZNF207 ZNF143 HLA-DMB TAP2 ENSG00000250264 TAP1 PSMB9 HSD17B8 RXRB SLC39A7 RNY4P10 MIR219A1
GH06G032982 1.3 Ensembl ENCODE dbSUPER 10.2 -216.1 -216074 1.4 HDGF FOXA2 SIN3A BMI1 FEZF1 CEBPG ZNF101 ZNF664 ZNF316 POLR2A HLA-DMA HLA-DMB ENSG00000250264 TAP2 TAP1 PSMB9 RNY4P10 RXRB SLC39A7 HSD17B8
GH06G032983 1.1 ENCODE dbSUPER 10.2 -217.0 -217043 0.2 KLF1 SIN3A BMI1 FEZF1 CEBPG BCL11B POLR2A SCRT2 KLF8 BCLAF1 HLA-DMB ENSG00000250264 TAP2 TAP1 PSMB9 RNY4P10 RXRB SLC39A7 HSD17B8 MIR219A1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around RNY4P10 on UCSC Golden Path with GeneCards custom track

Promoters for RNY4P10 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000320339 -301 201 ZNF362 GLIS1
ENSR00000195764 999 2001 MLX CREB3L1 FEZF1 DMAP1 YY1 ZNF143 SP3 NFYC TBX21 SSRP1

Genomic Location for RNY4P10 Gene

Chromosome:
6
Start:
33,199,601 bp from pter
End:
33,199,696 bp from pter
Size:
96 bases
Orientation:
Plus strand

Genomic View for RNY4P10 Gene

Genes around RNY4P10 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RNY4P10 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RNY4P10 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

Proteins for RNY4P10 Gene

Post-translational modifications for RNY4P10 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RNY4P10 Gene

Domains & Families for RNY4P10 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RNY4P10 Gene

Function for RNY4P10 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RNY4P10 Gene

Localization for RNY4P10 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for RNY4P10 Gene

Pathways & Interactions for RNY4P10 Gene

SuperPathways for RNY4P10 Gene

No Data Available

Interacting Proteins for RNY4P10 Gene

Gene Ontology (GO) - Biological Process for RNY4P10 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RNY4P10 Gene

Drugs & Compounds for RNY4P10 Gene

No Compound Related Data Available

Transcripts for RNY4P10 Gene

mRNA/cDNA for RNY4P10 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RNY4P10 Gene

No ASD Table

Relevant External Links for RNY4P10 Gene

GeneLoc Exon Structure for
RNY4P10
ECgene alternative splicing isoforms for
RNY4P10

Expression for RNY4P10 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RNY4P10 Gene

NURSA nuclear receptor signaling pathways regulating expression of RNY4P10 Gene:

RNY4P10
genes like me logo Genes that share expression patterns with RNY4P10: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RNY4P10 Gene

Orthologs for RNY4P10 Gene

This gene was present in the common ancestor of mammals.

Orthologs for RNY4P10 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia Y_RNA 35
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia Y_RNA 35
  • 94 (a)
OneToMany
Species where no ortholog for RNY4P10 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for RNY4P10 Gene

ENSEMBL:
Gene Tree for RNY4P10 (if available)
TreeFam:
Gene Tree for RNY4P10 (if available)

Paralogs for RNY4P10 Gene

No data available for Paralogs for RNY4P10 Gene

Variants for RNY4P10 Gene

Relevant External Links for RNY4P10 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RNY4P10

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RNY4P10 Gene

Disorders for RNY4P10 Gene

No disorders were found for RNY4P10 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RNY4P10 Gene

Publications for RNY4P10 Gene

No publications were found for RNY4P10 Gene.

Products for RNY4P10 Gene

Sources for RNY4P10 Gene

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